Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEE8
Confidence100.00%DateThu Jan 5 11:23:09 GMT 2012
Rank2Aligned Residues249
% Identity31%Templated2dpma_
SCOP infoS-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases N6 adenine-specific DNA methylase, DAM
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20....... ..30.........40.........50.........60.........70.........80.
Predicted Secondary structure 













.














Query SS confidence 
























.





















































Query Sequence  KNRAFLKWAGGKYPLLDDIKRHLPK. GECLVEPFVGAGSVFLNTDFSRYILADINSDLISLYNIVKMRTDEYVQAARELF
Query Conservation    

 


 


  
   
   

 .   




 




        

 

    
      
      

  
    
Alig confidence 
























.





















































Template Conservation 
  


 
 


  
   
   

     




 


 
         
 

    
      
      
        
Template Sequence  TLQPFTKWTGGKRQLLPVIRELIPKTYNRYFEPFVGGGALFFDLAPKDAVINDFNAELINCYQQIKDNPQELIEILKVHQ
Template Known Secondary structure 



SS

TT

GGGS
SS
S
TT
TT


SS

Template Predicted Secondary structure 





























Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   82.......90......... 100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 



....

























..
Query SS confidence 

















. . . .























































. .
Query Sequence  VPETNCAEVYYQFREEFN. . . . KSQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKA. .
Query Conservation               
    ....      
 
  
  
 
    
  
    
      
                  
..
Alig confidence 
..














....























































..
Template Conservation   ..          
                
  
  
 
  
 
  
    
      
            
        
Template Sequence  E. . YNSKEYYLDLRSADRDERIDMMSEVQRAARILYMLRVNFNGLYRVNSKNQFNVPYGRYKNPKIVDEELISAISVYIN
Template Known Secondary structure  ..

GGGGSSS
BGGG


B
TTS
B


B
SS

S



Template Predicted Secondary structure 
..

































Template SS confidence 















































































   90 .........100.........110.........120.........130.........140.........150.........160.......
 
   156...160.........170.........180.........190.........200.........210.........220.........230....
Predicted Secondary structure  .







































Query SS confidence  .














































































Query Sequence  . QNAFFYCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVERHIPVLISNHDTMLTR
Query Conservation  .    
   
    
      
 






           
    
   

  
   
           


     
 
Alig confidence  .

































.....







































Template Conservation     
 
   
    
       
 





     ..... 
    
   
   
   
  
        

      
 
Template Sequence  NNQLEIKVGDFEKAIVDVRTGDFVYFDPPYIPLFT. . . . . SYTHEGFSFADQVRLRDAFKRLSDTGAYVMLSNSSSALVE
Template Known Secondary structure  SS
GGGGGTT

TT









.....



SS

TTT
S
Template Predicted Secondary structure 


















.....















Template SS confidence 















































































   168.170.........180.........190.........200.. .......210.........220.........230.........240..
 
   235....240.........250.........260.........
Predicted Secondary structure 










Query SS confidence 


































Query Sequence  EWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYK
Query Conservation 


    
        
      
    


    
Alig confidence 















...........







Template Conservation    
    
        ...........



 

 
Template Sequence  ELYKDFNIHYVEGKIS. . . . . . . . . . . EIIVTNYE
Template Known Secondary structure  TTTS




...........S

Template Predicted Secondary structure 


...........


Template SS confidence 


































   248.250.........260... ......270.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions