Job Description P0AEE8 Confidence 93.24% Date Thu Jan 5 11:23:09 GMT 2012 Rank 34 Aligned Residues 135 % Identity 19% Template c3dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy Resolution 1.55 Å

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		15	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.														.	.
Query SS confidence														.	.	.	.														.	.
Query Sequence		Y	P	L	L	D	D	I	K	R	H	L	P	.	.	.	.	K	G	E	C	L	V	E	P	F	V	G	A	G	.	.	S	V	F	L	N	T	D	F	S	R	Y	I	L	A	D	I	N	S	D	L	I	S	L	Y	N	I	V	K	M	R	T	D	E	Y	V	Q	A	A	R	E	L	F	V	P	E	T	N	C	A
Query Conservation														.	.	.	.														.	.
Alig confidence														.	.	.	.														.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	L	L	E	A	L	Q	E	R	L	G	P	E	G	V	R	G	R	Q	V	L	D	L	G	A	G	Y	G	A	L	T	L	P	L	A	R	M	G	A	E	V	V	G	V	E	D	D	L	A	S	V	L	S	L	Q	K	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T	T	T	T	T							T		T	T	S	T	T							T	T								S	B												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	Y	Y	Q	F	R	E	E	F	N	K	S	Q	D	P	F	R	R	A	V	L	F	L	Y	L	N	R	Y	G	Y	N	G	L	C	R	Y	N	L	R	G	E	F	N	V	P	F	G	R	Y	K	K	P	Y	F	P	E	A	E	L	Y	H	F	A	E	K	A	Q	N	A	F	F	Y	C	E	S	Y	A	D	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	N	A	L	K	A	Q	A	L	H	S	D	V	D	E	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T									S	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																	276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		M	A	R	A	D	D	A	S	V	V	Y	C	D	P	P	Y	A	P	L	S	A	T	A	N	F	T	A	Y	H	T	N	S	F	T	L	E	Q	Q	A	H	L	A	E	I	A	E	G	L	V	E	R	H	I	P	V	L	I	S	N	H	D	T	.	.	.	.	M	L	T	R	E	W	Y	Q	R	A	K	L	H	V
Query Conservation																																																																.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	E	E	A	R	F	D	I	I	V	T	N	P	P	F	H	V	G	G	A	.	.	.	.	.	.	.	.	.	.	.	V	I	L	D	V	A	Q	A	F	V	N	V	A	A	A	R	L	R	P	G	G	V	F	F	L	V	S	N	P	F	L	K	Y	E	P	L	L	E	E	K	F	G	A	F	Q	T	L	K
Template Known Secondary structure		S		T	T														T	T		S	.	.	.	.	.	.	.	.	.	.	.	S																												T	T	S											S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.												.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions