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Job DescriptionP0AEE8
Confidence96.02%DateThu Jan 5 11:23:09 GMT 2012
Rank18Aligned Residues116
% Identity18%Templatec2vs1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   15....20.........30.........40. ........50.........60.........70.........80.........90..
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Query Sequence  YPLLDDIKRHLPKGECLVEPFVGAGSV. . FLNTDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYY
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Template Sequence  VNLVRKVSELVE. GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEI. . . . . . . . . . . . . . . . . . . . . . .
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   259260.........270 .........280.........290.........300.........310....
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
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Query Sequence  QFREEFNKSQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFFYCESYADSMARA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NNVDAEFEVASDREVSVKGF
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   315....320.........330....
 
   173......180.........190.........200.........210.........220.........230......
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Query Sequence  DDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVERHIPVLISNHDTMLTREW
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Template Sequence  . . . DTVIVDPPRAGLHP. . . . . . . . . . . . . . . . . . RLVKRLNRE. KPGVIVYVSCNPETFARDV
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   335....340........ .350....... ..360.........370......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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