Job Description P0AEE8 Confidence 71.57% Date Thu Jan 5 11:23:09 GMT 2012 Rank 94 Aligned Residues 82 % Identity 13% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		N	A	F	F	Y	C	E	S	Y	A	D	S	M	A	R	A	D	D	A	S	V	V	Y	C	D	P	P	Y	A	P	L	S	A	T	A	N	F	T	A	Y	H	T	N	S	F	T	L	E	Q	Q	A	H	L	A	E	I	A	E	G	L	V	E	R	H	I	P	V	L	I	S	N	H	D	.	.	.	.	T	M	L
Query Conservation																																																																											.	.	.	.
Alig confidence																	.	.																		.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation																	.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	E	V	F	A	S	N	V	F	S	E	V	K	G	.	.	R	F	D	X	I	I	S	N	P	P	F	H	D	G	M	Q	T	.	.	.	.	.	.	.	.	.	.	.	S	L	D	A	A	Q	T	L	I	R	G	A	V	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D	V
Template Known Secondary structure									S	T	T	T	T			S	.	.													S	S	S			.	.	.	.	.	.	.	.	.	.	.													G	G	G													T	T	S	S
Template Predicted Secondary structure																	.	.																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.												.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	W	Y	Q	R	A	K	L	H	V	V	K	V	R	R	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F	K	V
Template Known Secondary structure							S									S	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions