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Job DescriptionP0AEE8
Confidence100.00%DateThu Jan 5 11:23:09 GMT 2012
Rank1Aligned Residues246
% Identity100%Templatec2g1pB_
PDB info PDB header:transferase/dnaChain: B: PDB Molecule:dna adenine methylase; PDBTitle: structure of e. coli dna adenine methyltransferase (dam)
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  KNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFV
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Template Sequence  KNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFV
Template Known Secondary structure 



SS

TT

GGG



STT
TT
T


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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  PETNCAEVYYQFREEFNKSQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFFYC
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Template Sequence  PETNCAEVYYQFREEFNKSQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFFYC
Template Known Secondary structure  GGG
S


BGGG


B
TTS
B


B


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GGG
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  ESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVERHIPVLISNHDTMLTREWYQRAKL
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Template Sequence  ESYADSMARADDSSVVYCDPPYAPLTN. . . . . . . . . . SFTLEQQAHLAEIAEGLVERHIPVLISNHDTMLTREWYQRAKL
Template Known Secondary structure 

TT

TT

S





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TT



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   163......170.........180......... 190.........200.........210.........220.........230..
 
   243......250.........260.........270
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Query Sequence  HVVKVRRSISSNGGTRKKVDELLALYKP
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Template Conservation       ............           
Template Sequence  HVVKV. . . . . . . . . . . . KVDELLALYKP
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   243.... ..250........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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