Return to main results Retrieve Phyre Job Id

Job DescriptionP67553
Confidence10.59%DateThu Jan 5 12:10:39 GMT 2012
Rank16Aligned Residues28
% Identity11%Templatec1914A_
PDB info PDB header:alu domainChain: A: PDB Molecule:signal recognition particle 9/14 fusion protein; PDBTitle: signal recognition particle alu rna binding heterodimer, srp9/14
Resolution2.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   206...210.........220.........230...
Predicted Secondary structure 






Query SS confidence 



























Query Sequence  NPVDCQLIIVDEGVKPAVERVYTIKNTI
Query Conservation 

  
  
              
  
 
Alig confidence 



























Template Conservation   
 



  


   
 
 





  
Template Sequence  DPMKVRVVLKYRHVDGNLCIKVTDDLVC
Template Known Secondary structure 
TTT
TTTT
SSS
Template Predicted Secondary structure 










Template SS confidence 



























   4021........4030.........4040........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions