Return to main results Retrieve Phyre Job Id

Job DescriptionP30745
Confidence48.62%DateThu Jan 5 11:46:21 GMT 2012
Rank60Aligned Residues58
% Identity14%Templated1ob0a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.83

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160......... 170.........180....
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Query Sequence  HAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDV. . . . . . . . . . . . . . . . . . . . . . . . . . . . NHHQLDTFLNWIQHR
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Template Sequence  YMPNDGQHWKRLQNDSAYLAEHGITAVWIPPAYKGTSQADVGYGAYDLYDLGEFHQKGTVRTKYGTKGELQSAIKSLHSR
Template Known Secondary structure  T

SSS
TT




SB
SSTT

STT
SBTT
SS
S
BTTBSS
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T
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   185....190
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Query Sequence  PIQLRF
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Template Sequence  DINVYG
Template Known Secondary structure  T
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   94.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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