Return to main results Retrieve Phyre Job Id

Job DescriptionP30745
Confidence58.40%DateThu Jan 5 11:46:21 GMT 2012
Rank44Aligned Residues67
% Identity9%Templated1cxla4
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.81

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140......... 150.........160..... ....170.........180.....
Predicted Secondary structure 


..



..............................





Query SS confidence 











. .















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .



















Query Sequence  QDKFNQVMAGID. . AAFEAGFEKVKVNTVL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MRDVNHHQLDTFLNWIQHRP
Query Conservation        
   
 .. 
   
   
 
  
 ..............................    
   
  
       
Alig confidence 











..















..............................


.















Template Conservation 


  

  


  

  


  
 
 

                   

   
   

   
.
  


 

  

  
Template Sequence  GGDWQGIINKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYG. TIADFQNLIAAAHAKN
Template Known Secondary structure 


TTTTGGGT








TT
STTS
S
TTT
.
TT
Template Predicted Secondary structure 













































.


Template SS confidence 















































































   51........60.........70.........80.........90.........100.........110... ......120.........
 
   186...190 .........200.....
Predicted Secondary structure 

.







Query SS confidence 




.














Query Sequence  IQLRF. IELMETGEGSELFRK
Query Conservation       .               
Alig confidence 




.














Template Conservation 
 



 
 

 
        
Template Sequence  IKVIIDFAPNHTSPASSDQPS
Template Known Secondary structure 

TT

TT
TT
Template Predicted Secondary structure 












Template SS confidence 




















   130.........140.........150
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions