Return to main results Retrieve Phyre Job Id

Job DescriptionP30745
Confidence63.97%DateThu Jan 5 11:46:21 GMT 2012
Rank40Aligned Residues74
% Identity18%Templated1bf2a3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170 .......
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Query Sequence  TGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HHQLDTF
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Template Sequence  QYRGTYYGAGLKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAM
Template Known Secondary structure  GGTTSTT

S

B
BS
TTTTSSTT

TT


S


BS
SS
B
GGG
S

STT
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   199200.........210.........220.........230.........240.........250.........260.........270........
 
   178.180.........190 .........200.........
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Query Sequence  LNWIQHRPIQLRF. IELMETGEGSELFRKHHIS
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Template Sequence  VQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTT
Template Known Secondary structure  TT


SS
TT
SBSSSS
SS
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   279280.........290.........300.........310.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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