Return to main results Retrieve Phyre Job Id

Job DescriptionP30745
Confidence65.29%DateThu Jan 5 11:46:21 GMT 2012
Rank37Aligned Residues136
% Identity13%Templatec3hpxB_
PDB info PDB header:transferaseChain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of mycobacterium tuberculosis leua active site2 domain 1-425 (truncation mutant delta:426-644)
Resolution2.03 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.. .......100.........110.........120.
Predicted Secondary structure 















.....












Query SS confidence 













































. . . . .




























Query Sequence  LTVDEIRRVTRAFARLGTEKVRLTGGEPSLRRDFTDIIAAVRENDA. . . . . IRQIAVTTNGYRLERDVASWRDAGLTGIN
Query Conservation 
  
     
      
       



                  .....      
    
               
 
Alig confidence 
























..


















.....




























Template Conservation   
 
 

 

  
   

  



 ..
  
  
 
 
  
         
 
  
   
   
  
 

  

    
 
Template Sequence  MSPARKRRMFDLLVRMGYKEIEVGF. . PSASQTDFDFVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACSGAPRAIVH
Template Known Secondary structure 

T
S
..TTT
TT
S
TT
S
TTT
S
Template Predicted Secondary structure 






..



















Template SS confidence 















































































   90.........100.........110.... .....120.........130.........140.........150.........160.......
 
   122.......130......... 140.........150.... .....160.........170.........180.....
Predicted Secondary structure 








..

.......








Query SS confidence 

















. .














. . . . . . .






























Query Sequence  VSVDSLDARQFHAITGQD. . KFNQVMAGIDAAFEA. . . . . . . GFEKVKVNTVLMRDVNHHQLDTFLNWIQHRP
Query Conservation 

 
              ..    
   
  
   .......
   
 
  
     
   
  
       
Alig confidence 

















..














.......

.



























Template Conservation 
  
 

 
    
  
  
 
      
  
           
. 
 
  

  
        
      
 
Template Sequence  FYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQW. RFEYSPESYTGTELEYAKQVCDAVGEVI
Template Known Secondary structure 

TT


STTS.TGGGS
Template Predicted Secondary structure 








.







Template SS confidence 








































































   168.170.........180.........190.........200.........210. ........220.........230.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions