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Job DescriptionP30745
Confidence45.72%DateThu Jan 5 11:46:21 GMT 2012
Rank68Aligned Residues110
% Identity17%Templatec2zq0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-glucosidase (alpha-glucosidase susb); PDBTitle: crystal structure of susb complexed with acarbose
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70. ........ 80.........90.........100......
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Query Sequence  LTVDEIRRVTRAFARLGTEKVRLTG. . . GEPSLRRD. . . . . . . . . . . . . . . . FTDIIAAVRENDAIRQIAVTTNGYRLE.
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Template Sequence  ANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNY
Template Known Secondary structure 

TT
S
S
BTTGGG
SSS

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SS
B
TT

TT

TTB
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   368.370.........380.........390.........400.........410.........420.........430.........440.......
 
   107..110.........120.........130.........140.........150......
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Query Sequence  . . . . . RDVASWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGF
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Template Sequence  ERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAADYKI
Template Known Secondary structure  TT



SS
BSTT

TTSTT
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   448.450.........460.........470.........480.........490.........500..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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