Job Description P30745 Confidence 31.83% Date Thu Jan 5 11:46:21 GMT 2012 Rank 96 Aligned Residues 105 % Identity 18% Template c2rfgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from hahella2 chejuensis at 1.5a resolution Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.				.	.
Query SS confidence																														.	.				.	.
Query Sequence		K	G	F	L	T	V	D	E	I	R	R	V	T	R	A	F	A	R	L	G	T	E	K	V	R	L	T	G	.	.	G	E	P	.	.	S	L	R	R	D	F	T	D	I	I	A	A	V	R	E	N	D	A	I	R	Q	I	A	V	T	T	N	G	Y	R	L	E	R	D	V	A	S	W	R	D	A	G	L	T	G
Query Conservation																														.	.				.	.
Alig confidence																														.	.				.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	Q	V	D	E	K	A	L	A	G	L	V	D	W	Q	I	K	H	G	A	H	G	L	V	P	V	G	T	T	G	E	S	P	T	L	T	E	E	E	H	K	R	V	V	A	L	V	A	E	Q	A	Q	G	R	V	P	V	I	A	G	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T																	T	T		S				T	T	S	G	G	G	T	G	G	G	S																	T	T	S	S		B							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	V	S	V	D	S	L	D	A	R	Q	F	H	A	I	T	G	Q	D	K	F	N	Q	V	M	A	G	I	D	A	A	F	E	A	G	F	E	K	V	K	V	N	T	V	L	M	R	D	V	N	H	H	Q	L	D	T	F	L	N	W	I	Q	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	P	V	E	A	V	R	Y	A	Q	H	A	Q	Q	A	G	A	D	A	V	L	C	V	A	G	Y	Y	N	R	P	S	Q	E	G	L	Y	Q	H	F	K	M	V	H	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S														T	T		S								T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions