Return to main results Retrieve Phyre Job Id

Job DescriptionP30745
Confidence47.90%DateThu Jan 5 11:46:21 GMT 2012
Rank63Aligned Residues69
% Identity17%Templatec2qpuB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-amylase type a isozyme; PDBTitle: sugar tongs mutant s378p in complex with acarbose
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160....... ..170.........180.........190 .....
Predicted Secondary structure 









...................






.


Query SS confidence 































. . . . . . . . . . . . . . . . . . .






















.




Query Sequence  TGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMR. . . . . . . . . . . . . . . . . . . DVNHHQLDTFLNWIQHRPIQLRF. IELME
Query Conservation          
   
  
   
   
 
  
   ...................  
   
  
       
     .     
Alig confidence 































...................
.




















.




Template Conservation    


  

  




  


 



 

      


   

  

    
.
  


 

  

  

 



 
 

Template Sequence  QSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYG. NAAELKSLIGALHGKGVQAIADIVINH
Template Known Secondary structure 
TT
GGGTT




S
BSSTTS
SB

TT
GGG
SS
.
TT


SB
Template Predicted Secondary structure 































.






Template SS confidence 















































































   15....20.........30.........40.........50.........60...... ...70.........80.........90...
 
   196...200.....
Predicted Secondary structure 




Query SS confidence 









Query Sequence  TGEGSELFRK
Query Conservation            
Alig confidence 









Template Conservation            
Template Sequence  RCADYKDSRG
Template Known Secondary structure 


S
TTS
Template Predicted Secondary structure 









Template SS confidence 









   94.....100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions