Return to main results Retrieve Phyre Job Id

Job DescriptionP30745
Confidence82.13%DateThu Jan 5 11:46:21 GMT 2012
Rank25Aligned Residues144
% Identity12%Templatec2nx9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70..... ....80.........90.........100.........110.........120
Predicted Secondary structure 










......

















Query SS confidence 




























. . . . . .












































Query Sequence  LTVDEIRRVTRAFARLGTEKVRLTGGEPS. . . . . . LRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVASWRDAGLTGI
Query Conservation 
  
     
      
       



 ......                       
    
               
Alig confidence 




























......












































Template Conservation    
  
  

  
  


  



  
          

  
 
       
   
  
 

            
    
Template Sequence  LRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFV
Template Known Secondary structure 

TTTTS

STTT



TTS

GGGTTSSS


Template Predicted Secondary structure 



























Template SS confidence 















































































   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   121........130.........140.........150....... ..160.........170.........180.........190.
Predicted Secondary structure 













.







Query SS confidence 




































.

































Query Sequence  NVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFE. KVKVNTVLMRDVNHHQLDTFLNWIQHRPIQLRFI
Query Conservation   

 
                  
   
  
   
  . 
 
  
     
   
  
       
      
Alig confidence 






.




























.

































Template Conservation    
   
.
   

   
         
  

  
  
   
          
     
  
   


 
 
Template Sequence  ERAVKNG. MDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIAL
Template Known Secondary structure  T.



TT

T




TT

TT
S
Template Predicted Secondary structure 

.


















Template SS confidence 







































































   107..110... ......120.........130.........140.........150.........160.........170.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions