Job Description P0ADV7 Confidence 47.46% Date Thu Jan 5 11:21:56 GMT 2012 Rank 69 Aligned Residues 45 % Identity 20% Template c2gzkA_ PDB info PDB header:dna/structural protein Chain: A: PDB Molecule:sex-determining region on y / hmgb1; PDBTitle: structure of a complex of tandem hmg boxes and dna Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	V	Q	V	K	Y	A	G	A	L	V	L	G	Q	Y	Y	K	S	A	T	P	A	Q	R	E	A	Y	F	A	A	F	R	E	Y	L	K	Q	A	Y	G	Q	A	L	A	M	Y
Query Conservation
Alig confidence												.																									.
Template Conservation												.																									.
Template Sequence		P	G	L	S	I	G	D	V	A	K	.	K	L	G	E	M	W	N	N	T	A	A	D	D	K	Q	P	Y	E	K	K	A	A	K	L	.	K	E	K	Y	E	K	D	I	A	A	Y
Template Known Secondary structure		S										.									S																.
Template Predicted Secondary structure												.																									.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions