Job Description P77732 Confidence 96.08% Date Thu Jan 5 12:32:14 GMT 2012 Rank 173 Aligned Residues 64 % Identity 16% Template d2h6ca1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 2.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.												.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.		.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.		.
Query Sequence		P	A	L	T	R	A	I	D	I	L	N	L	I	A	R	I	.	.	.	.	.	.	.	.	.	.	.	G	.	P	C	S	A	A	T	I	I	D	T	L	G	I	P	K	S	T	A	Y	L	L	L	N	E	L	R	R	Q	R	F	L	S	L	D	H	Q	E	N	F	C	L	W	T	R	L	V	E
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.		.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.		.
Template Conservation
Template Sequence		N	P	T	I	R	I	L	R	L	F	Y	E	L	C	S	S	Q	G	K	R	V	G	D	T	Y	E	I	T	M	P	L	S	Q	K	S	I	G	E	I	T	G	A	H	H	V	T	V	S	K	V	L	A	C	L	K	K	E	N	I	L	D	K	K	K	N	K	F	I	V	Y	N	L	E	E	L	K
Template Known Secondary structure																							T	T																		T																T	T	S					S	S					S						T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions