 |
Job Description | P77732 | Confidence | 95.94% | Date | Thu Jan 5 12:32:14 GMT 2012 |
Rank | 177 | Aligned Residues | 55 |
% Identity | 16% | Template | d2f2ea1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| HxlR-like
|
Resolution | 1.85 |
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
| . | . | . | . | . |  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
A | I | D | I | L | N | L | I | A | R | I | G | P | C | S | A | A | T | I | I | D | T | L | G | I | P | K | S | T | A | Y | L | L | L | N | E | L | R | R | Q | R | F | L | S | L | D | H | Q | E | N | . |
. |
. |
. |
. |
F | C | L | W | T | R |
Query Conservation |   |
  |
|   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   | . | . | . | . | . |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|   | . |   |
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |
Template Sequence |   |
S | X | L | I | V | R | D | A | F | . |
E | G | L | T | R | F | G | E | F | Q | K | S | L | G | L | A | K | N | I | L | A | A | R | L | R | N | L | V | E | H | G | V | X | V | A | V | P | A | E | S | G | S | H | Q | E | Y | R | L | T | D | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | T | T |
|
| S |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
| S | S | S | S |
|  |  |  |  |  |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
26 | . | . | . | 30 | . | . | . | . | |
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|