Job Description P77732 Confidence 100.00% Date Thu Jan 5 12:32:14 GMT 2012 Rank 6 Aligned Residues 243 % Identity 21% Template c2o0yB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator rha1_ro069532 (iclr-family) from rhodococcus sp. Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		S	K	V	P	A	L	T	R	A	I	D	I	L	N	L	I	A	R	I	G	.	P	C	S	A	A	T	I	I	D	T	L	G	I	P	K	S	T	A	Y	L	L	L	N	E	L	R	R	Q	R	F	L	S	L	D	H	Q	E	N	F	C	L	W	T	R	L	V	E	L	S	G	H	A	L	S	K	M	D	L	R
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		A	G	V	R	S	V	T	R	V	I	D	L	L	E	L	F	D	A	A	H	P	T	R	S	L	K	E	L	V	E	G	T	K	L	P	K	T	T	V	V	R	L	V	A	T	X	C	A	R	S	V	L	T	S	R	A	D	G	S	Y	S	L	G	P	E	X	L	R	W	V	R	L	A	G	R	T	W	A	P	P
Template Known Secondary structure															T	T		B	T	T	B	S												T																T	T	S					T	T	S						G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	R	P	R	L	T	Q	L	M	D	T	T	G	L	L	C	H	L	G	I	I	D	N	G	S	A	Y	Y	I	L	K	V	E	S	S	A	T	I	S	V	R	S	H	E	G	K	S	L	S	L	Y	R	S	G	I	G	K	C	L	L	A	W	Q	P	A	A	V	Q	Q	S	I	I	E	G	L	V	W	E
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.
Template Sequence		E	E	V	V	D	I	X	R	Q	L	S	A	D	T	G	E	T	V	N	L	Y	I	R	Q	G	L	S	R	V	V	V	A	Q	C	E	S	T	A	T	V	R	S	V	I	P	L	G	V	P	Y	P	L	W	A	G	A	A	G	K	I	L	L	L	A	A	P	E	L	I	D	D	.	.	.	.	.	.	.	V	A
Template Known Secondary structure																S	S									T	T											S		S	S						T	T					S	S	S	S							G	G	G		G	G	G				.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.								.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	T	P	T	T	I	T	H	P	Q	Q	L	H	E	E	L	A	R	I	R	R	Q	G	W	S	Y	D	N	G	E	D	Y	A	D	V	R	C	V	A	A	P	V	F	N	A	N	N	E	L	T	A	A	I	S	V	V	G	T	R	L	Q	I	N	E	E	Y	R	D	Y	L	A	G	K	A	I	A	C	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	S	P	H	G	P	E	F	A	D	Q	L	R	E	K	V	E	D	G	R	E	R	G	Y	Q	L	V	H	G	E	R	E	L	G	S	S	G	L	S	F	P	L	V	D	S	H	G	T	V	V	A	A	L	T	L	G	G	P	T	G	R	F	T	E	D	R	T	P	H	Y	I	E	C	T	R	A	A	A	E
Template Known Secondary structure				S	S	S		T	T																S	S					S	S	S	S	T	T											T	T													G	G	G	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	S	R	L	L	G	W	K	S	P	F
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		E	I	S	.	A	I	G	L	P	G	L	D
Template Known Secondary structure					.					T	T	T
Template Predicted Secondary structure					.
Template SS confidence
		250	.	.		.	.	.	.	.	.	.	260

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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