Job Description P77732 Confidence 100.00% Date Thu Jan 5 12:32:14 GMT 2012 Rank 5 Aligned Residues 242 % Identity 24% Template c2ia2D_ PDB info PDB header:transcription Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a putative transcriptional regulator rha061952 from rhodococcus sp. rha1 Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	P	A	L	T	R	A	I	D	I	L	N	L	I	A	R	I	G	.	P	C	S	A	A	T	I	I	D	T	L	G	I	P	K	S	T	A	Y	L	L	L	N	E	L	R	R	Q	R	F	L	S	L	D	H	Q	E	N	F	C	L	W	T	R	L	V	E	L	S	G	H	A	L	S	K	M	D	L	R	E	L
Query Conservation																				.
Alig confidence																				.																																.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		V	Q	S	L	A	R	G	L	A	V	I	R	C	F	D	H	R	N	Q	R	R	T	L	S	D	V	A	R	A	T	D	L	T	R	A	T	A	R	R	F	L	L	T	L	V	E	L	G	Y	V	.	.	.	.	.	A	A	F	W	L	T	P	R	V	L	E	L	G	Y	S	Y	L	S	S	L	S	L	P	E	V
Template Known Secondary structure														T			S	S														T																T	T	S	B	.	.	.	.	.					B		G	G	G											S	S
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	P	R	L	T	Q	L	M	D	T	T	G	L	L	C	H	L	G	I	I	D	N	G	S	A	Y	Y	I	L	K	V	E	S	S	A	T	I	S	V	R	S	H	E	G	K	S	L	S	L	Y	R	S	G	I	G	K	C	L	L	A	W	Q	P	A	A	V	Q	Q	S	I	I	E	G	L	V	W	E	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	P	H	L	E	K	L	S	H	K	V	H	E	S	S	S	V	S	I	L	D	G	A	D	I	V	Y	V	A	R	V	P	V	S	R	I	X	T	V	G	I	T	I	G	T	R	L	P	A	Y	A	T	S	X	G	R	V	L	L	A	G	L	P	D	D	E	L	D	A	Y	L	E	K	L	D	I	Q	R	L
Template Known Secondary structure															S									T	T										B		S	S	S		B				T	T					G	G	G	S									T	S											T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		T	P	T	T	I	T	H	P	Q	Q	L	H	E	E	L	A	R	I	R	R	Q	G	W	S	Y	D	N	G	E	D	Y	A	D	V	R	C	V	A	A	P	V	F	N	A	N	N	E	L	T	A	A	I	S	V	V	G	T	R	L	Q	I	N	E	E	Y	.	R	D	Y	L	A	G	K	A	I	A	C	A	R	D
Query Conservation																																																																			.
Alig confidence																																																																			.
Template Conservation
Template Sequence		T	E	R	T	I	T	A	R	D	E	L	K	A	A	I	L	A	V	R	A	D	G	I	C	V	L	D	Q	E	L	E	A	G	L	R	S	X	A	A	P	I	R	G	A	S	G	L	T	V	A	A	V	N	I	S	T	P	A	A	R	Y	S	L	E	D	L	H	S	D	L	I	P	S	L	R	V	T	A	T	D
Template Known Secondary structure		S	T	T	S																		S						S	S	S	S	T	T											T	T	S	S											G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		245	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	R	L	L	G	W	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	Q	D	L	A	T	V	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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