Job Description P77732 Confidence 97.26% Date Thu Jan 5 12:32:14 GMT 2012 Rank 113 Aligned Residues 220 % Identity 15% Template c1stzB_ PDB info PDB header:transcription Chain: B: PDB Molecule:heat-inducible transcription repressor hrca homolog; PDBTitle: crystal structure of a hypothetical protein at 2.2 a resolution Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.												.	.																											.	.			.	.
Query SS confidence															.	.	.	.	.												.	.																											.	.			.	.
Query Sequence		T	R	A	I	D	I	L	N	L	I	A	R	I	.	.	.	.	.	G	P	C	S	A	A	T	I	I	D	T	.	.	L	G	I	P	K	S	T	A	Y	L	L	L	N	E	L	R	R	Q	R	F	L	S	L	D	H	Q	.	.	E	N	.	.	F	C	L	W	T	R	L	V	E	L	S	G	H	A	L	S	K
Query Conservation															.	.	.	.	.												.	.																											.	.			.	.
Alig confidence															.	.	.	.	.												.	.																											.	.			.	.
Template Conservation
Template Sequence		D	R	Q	R	K	V	L	Y	C	I	V	R	E	Y	I	E	N	K	K	P	V	S	S	Q	R	V	L	E	V	S	N	I	E	F	S	S	A	T	I	R	N	D	M	K	K	L	E	Y	L	G	Y	I	Y	Q	P	H	T	S	A	G	R	I	P	T	D	K	G	L	R	F	Y	Y	E	E	M	L	K	I	S	M
Template Known Secondary structure																				S		B									S				S															T	T	S					S	S		S		B
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Query SS confidence		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Query Sequence		.	.	M	D	L	R	E	L	A	R	P	R	L	T	Q	L	M	D	T	T	G	L	L	C	H	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	N	G	S	A	Y	Y	I	L	K	V	E	S	S	A	T	I	S	V	R	S	H	E	G	K	S	L	S	.	.	.	.	.	.	.	.
Query Conservation		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Alig confidence		.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	A	D	P	E	K	V	L	F	L	A	G	N	L	L	A	R	L	T	E	G	Y	V	L	I	E	R	P	N	T	R	D	L	K	I	L	R	V	M	L	I	P	V	S	E	D	Y	L	I	F	S	I	L	T	E	F	G	V	S	K	V	T	P	I	K	T	Q	E	R	L	N	W	E	E	I	E	R	Q	L
Template Known Secondary structure																						T										T	T	S		B										S	S	S									T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
																																									135	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	R	S	G	I	G	K	C	L	L	A	.	W	Q	P	A	A	V	Q	Q	S	I	I	E	G	L	V	W	E	Q	A	T	P	T	T	I	T	H	P	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	L	L	R	G	R	T	V	G	E	V	L	M	G	K	I	E	S	L	K	G	S	G	F	L	R	L	I	E	S	L	I	G	E	T	V	E	R	Y	L	D	A	G	L	E	N	L	L	K	D	E	T	L	T	L	E	D	I	R	N	L	L	E	E	V	K	D	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T		B						T	T			G	G	G	G	S	S											T					S												S	T	T													T	T			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		Q	L	H	E	E	L	A	R	I	R	R	Q	G	W	S	Y	D	N	G	E	D	Y	.	.	.	.	.	A	D	V	R	C	V	A	A	P	V	F	N	A	N	N	E	L	T	A	A	I	S	V	V	G	T	R	L	Q	I	N	E	E	Y	R	D	Y	L	A	G	K	A	I	A	C	A	R	D	I	S	R	L	L
Query Conservation																								.	.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.												.																.			.	.	.
Template Conservation		.	.	.																																				.																.			.	.	.
Template Sequence		.	.	.	K	F	L	E	S	L	V	G	E	G	I	T	V	R	I	G	R	E	I	G	R	K	K	L	E	K	F	A	V	F	S	G	K	Y	F	.	K	G	E	S	P	I	G	S	V	Y	L	F	T	S	K	.	V	T	.	.	.	K	Y	D	R	N	H	R	V	F	E	Y	I	L	N	R	L	S	E	Y	F
Template Known Secondary structure		.	.	.									S	S	S					G	G	G	G	S		G	G	G	T	T										.		T	T												S	.	S	S	.	.	.
Template Predicted Secondary structure		.	.	.																																				.																.			.	.	.
Template SS confidence
					261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.				.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions