Job Description P0A8N3 Confidence 100.00% Date Thu Jan 5 11:08:14 GMT 2012 Rank 12 Aligned Residues 398 % Identity 21% Template c3m4qA_ PDB info PDB header:ligase Chain: A: PDB Molecule:asparaginyl-trna synthetase, putative; PDBTitle: entamoeba histolytica asparaginyl-trna synthetase (asnrs) Resolution 3.00 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																								.																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																																																	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	A	L	N	I	E	V	A	V	A	G	R	M	M	T	R	R	I	M	G	K	.	A	S	F	V	T	L	Q	D	V	G	G	R	I	Q	L	Y	V	A	R	D	D	L	P	E	G	V	Y	N	E	Q	F	K	K	W	D	L	G	D	I	L	G	A	K	G	K	L	F	K	.	.	.	.	.	.	.	.	.
Query Conservation																								.																																																	.	.	.	.	.	.	.	.	.
Alig confidence																								.																										.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.
Template Sequence		A	G	L	E	G	K	L	V	T	F	K	G	W	A	Y	H	I	R	K	A	R	K	T	L	I	F	V	E	L	R	D	G	S	G	Y	C	Q	C	V	I	F	G	K	E	L	C	E	P	.	.	.	E	K	V	K	L	L	T	R	E	C	S	L	E	I	T	G	R	L	N	A	Y	A	G	K	N	H	P	P	E
Template Known Secondary structure		T			S	S	S																T	T									S	S									S	S	S	S				.	.	.								T	T														T	T					S
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
			131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	T	K	T	G	E	L	S	I	H	C	T	E	L	R	L	L	T	K	A	L	R	P	L	P	D	K	F	H	G	L	Q	D	Q	E	A	R	Y	R	Q	R	Y	L	D	L	I	S	N	D	E	S	R	N	T	F	K	V	R	S	Q	I	L	S	G	I	R	Q	F	M	V	N	R	G	F	M	E	V	E	T	P
Query Conservation		.
Alig confidence		.																																													.
Template Conservation																																															.
Template Sequence		I	A	D	I	L	N	L	E	M	Q	V	T	E	W	K	V	I	G	E	S	P	I	D	L	E	N	I	I	N	K	D	S	S	I	P	Q	K	M	Q	N	R	H	I	V	I	.	R	S	E	H	T	Q	Q	V	L	Q	L	R	S	E	I	Q	W	Y	F	R	K	Y	Y	H	D	N	H	F	T	E	I	Q	P	P
Template Known Secondary structure			T	T	B		S																T	T					S	S	S										T					T	.	T	S																								T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	Q	V	I	P	G	G	A	A	A	R	P	F	I	T	H	H	N	A	L	D	L	D	M	Y	L	R	I	A	P	E	L	Y	L	K	R	L	V	V	G	G	F	E	R	V	F	E	I	N	R	N	F	R	N	E	G	I	S	V	R	H	N	P	E	F	T	M	M	E	L	Y	M	A	Y	A	D	Y	K	D
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.																							.																		.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.																							.																		.	.	.	.	.
Template Sequence		T	I	V	K	T	T	L	F	.	.	.	.	.	.	.	.	K	L	Q	Y	F	N	E	P	A	Y	L	T	Q	S	S	Q	L	Y	L	E	S	V	.	I	A	S	L	G	K	S	F	C	M	L	S	S	Y	R	A	E	.	.	.	.	.	H	L	A	E	Y	L	H	L	E	A	E	L	P	F	I	S	F	E	D
Template Known Secondary structure		S								.	.	.	.	.	.	.	.					T	T							S										.						S												.	.	.	.	.			S											S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																							.																		.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.									.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		L	I	E	L	T	E	S	L	F	R	T	L	A	Q	D	I	L	G	K	T	E	V	T	Y	G	D	V	T	L	D	.	.	.	F	G	K	P	F	E	K	L	T	M	R	E	A	I	K	K	Y	R	P	E	T	D	M	A	D	L	D	N	F	D	S	A	K	A	I	A	E	S	I	G	I	H	V	E	K	S	W
Query Conservation																																.	.	.
Alig confidence																																.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	N	H	L	E	D	L	V	C	T	V	I	D	N	V	M	A	V	H	G	D	K	I	R	K	M	N	P	H	L	K	L	P	T	R	P	F	K	R	M	T	Y	A	D	A	I	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	N	D	H	G	I	L	N	K	D	K	P	F
Template Known Secondary structure																														T	T						S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T			S	S	S	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.																			.	.	.	.	.	.	310	.	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																																					.																					.
Query SS confidence																																					.																					.
Query Sequence		G	L	G	R	I	V	T	E	I	F	E	E	V	A	E	A	H	L	I	Q	P	T	F	I	T	E	Y	P	A	E	V	S	P	L	A	.	R	R	N	D	V	N	P	E	I	T	D	R	F	E	F	F	I	G	G	R	.	E	I	G	N	G	F	S	E	L	N	D	A	E	D	Q	A	Q	R	F	L	D	Q	V
Query Conservation																																					.																					.
Alig confidence																																					.																					.
Template Conservation
Template Sequence		E	Y	G	E	D	I	S	E	K	P	E	R	Q	M	T	D	E	I	G	C	P	I	F	M	I	H	F	P	S	K	M	K	A	F	Y	M	S	K	V	P	G	H	P	D	L	T	E	S	V	D	L	L	M	P	G	V	G	E	I	V	G	G	S	M	R	I	W	N	Y	D	E	L	M	G	A	Y	K	A	N	G
Template Known Secondary structure			T	T																	S								B	G	G	G	S		S	S	B				T	T													T	T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	D	A	G	D	D	E	A	M	F	Y	D	E	D	Y	V	T	A	L	E	H	G	L	P	P	T	A	G	L	G	I	G	I	D	R	M	V	M	L	F	T	N	S	H	T	I	R	D	V	I	L	F	P	A	M	R
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.
Template Sequence		L	N	P	D	P	.	.	.	.	.	.	.	.	Y	Y	W	Y	T	Q	Q	R	K	Y	G	S	C	P	H	G	G	Y	G	L	G	V	E	R	L	V	M	W	L	L	G	E	D	H	I	R	K	V	C	L	Y	P	R	Y	L
Template Known Secondary structure					G	G	.	.	.	.	.	.	.	.	G									T	T																				T		S	S	G	G	G	G	S	S	S			B	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.
Template SS confidence
		397	.	.	400	.									.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.