Job Description P0A8N3 Confidence 98.83% Date Thu Jan 5 11:08:14 GMT 2012 Rank 71 Aligned Residues 135 % Identity 15% Template c3lssA_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp Resolution 1.95 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.									.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.																					.
Query SS confidence																																				.	.	.	.	.	.	.	.																					.
Query Sequence		N	T	F	K	V	R	S	Q	I	L	S	G	I	R	Q	F	M	V	N	R	G	F	M	E	V	E	T	P	M	M	Q	V	I	P	.	.	.	.	.	.	.	.	G	G	A	A	A	R	P	F	I	T	H	H	N	A	L	D	L	D	M	Y	.	L	R	I	A	P	E	L	Y	L	K	R	L	V	V	G	G	F
Query Conservation																																				.	.	.	.	.	.	.	.																					.
Alig confidence																																				.	.	.	.	.	.	.	.											.	.									.
Template Conservation																																																						.	.
Template Sequence		G	L	V	Q	L	Q	V	A	L	V	S	Y	S	L	D	F	L	V	K	R	G	Y	T	P	F	Y	P	P	F	F	L	N	R	D	V	M	G	E	V	A	Q	L	S	Q	F	D	E	E	L	Y	Q	V	.	.	S	G	D	G	D	K	K	Y	L	I	A	T	S	E	M	P	I	A	A	Y	H	R	G	R	W	F
Template Known Secondary structure																				T	T	T								S											S								T					.	.		S	S	S	S						S	S	T								T	T	T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		253							.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270								.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.																		.	.	.	.	.	.	.													.
Query SS confidence			.	.	.	.	.	.																		.	.	.	.	.	.	.													.
Query Sequence		E	.	.	.	.	.	.	R	V	F	E	I	N	R	N	F	R	N	E	G	I	S	V	R	.	.	.	.	.	.	.	H	N	P	E	F	T	M	M	E	L	Y	M	.	A	Y	A	D	Y	K	D	L	I	E	L	T	E	S	L	F	R	T	L	A	Q	D	I	L	G	K	T	E	V	T	Y	G	D	V	T	L
Query Conservation			.	.	.	.	.	.																		.	.	.	.	.	.	.													.
Alig confidence			.	.	.	.	.	.																		.	.	.	.	.	.	.													.																				.
Template Conservation																																																																	.
Template Sequence		T	E	L	K	E	P	L	K	Y	A	G	M	S	T	C	F	R	K	E	A	G	A	H	G	R	D	T	L	G	I	F	R	V	H	Q	F	D	K	I	E	Q	F	V	V	C	S	P	R	Q	E	E	S	W	R	H	L	E	D	M	I	T	T	S	.	E	E	F	N	K	S	L	G	L	P	Y	R	V	V	N	I
Template Known Secondary structure		S			S	S															T	T		S	S	S			S	T	T	S	S		S													S	S	T	T														.								T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		319
Predicted Secondary structure
Query SS confidence
Query Sequence		D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		358

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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