Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8N3
Confidence85.69%DateThu Jan 5 11:08:14 GMT 2012
Rank120Aligned Residues220
% Identity22%Templatec3hxxA_
PDB info PDB header:ligaseChain: A: PDB Molecule:alanyl-trna synthetase; PDBTitle: crystal structure of catalytic fragment of e. coli alars in complex2 with amppcp
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210.........220.........230.........240.........250 .........260...
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Query Sequence  SQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVVG. . . . GFERVFEINRNFR
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Template Sequence  AEIRQAFLDFFHSKGHQVVASSSLVPHNDP. . . . . . . . . . . . . . . TLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVR
Template Known Secondary structure  TT





SS
TT
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STTGGGTSS

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S
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   5....10.........20.........30.... .....40.........50.........60.........
 
   264.....270.........280.........290.........300.........310.........320.........330....
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Query Sequence  . . . . . . . . . NEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIK
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Template Sequence  AGGKHNDLENVGYTARHHTFFEMLG. NFSFGDY. . . . . FKLDAILFAWLLLTSEKWFALPKERLWVT. . . . . . . . . . . . .
Template Known Secondary structure  TT
TTTTTTSSS

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TTTT


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   70.........80.........90.... .....100. ........110.........120.........130
 
   335....340.........350.........360.........370.........380.........390... ......400.........410.
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Query Sequence  KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEY. . . PAEVSPLARRNDVNPEIT
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Template Sequence  . . . . . . . . VYESDDEAYEIWEKEVGIPRE. . . . . . . . . . . . . . . . . . . . . . RIIRIGDNKGAPYASDNFWQMGDTGP. CG
Template Known Secondary structure  ........TT
TT


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STTSSTT
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   131........140.........150. ........160.........170....... ..
 
   412...... .420.........430.........440.........450.........460.........470..
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Query Sequence  DRFEFFI. . . . . . . . . . . . . . . . . . . GGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPT
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Template Sequence  PCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFM. . . . . . . . . . . . . QFNRQADGTMEPLPK. . . . . . . . . . . . . PS
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TTS



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   180.........190.........200.........210...... ...220.........230. ..
 
   473......480.........490........
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Query Sequence  AGLGIGIDRMVMLFTNSHTIRDVILF
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Template Sequence  VDTGMGLERIAAVLQHVNSNYDIDLF
Template Known Secondary structure  TT
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   234.....240.........250.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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