Job Description P0A8N3 Confidence 97.35% Date Thu Jan 5 11:08:14 GMT 2012 Rank 94 Aligned Residues 78 % Identity 18% Template c3dm3A_ PDB info PDB header:replication Chain: A: PDB Molecule:replication factor a; PDBTitle: crystal structure of a domain of a replication factor a2 protein, from methanocaldococcus jannaschii. northeast3 structural genomics target mjr118e Resolution 2.40 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.										.	.	.
Query SS confidence																.	.	.	.	.	.	.										.	.	.
Query Sequence		L	N	I	E	V	A	V	A	G	R	M	M	T	R	.	.	.	.	.	.	.	R	I	M	G	K	A	S	F	V	.	.	.	T	L	Q	D	V	G	G	R	I	Q	L	Y	V	A	R	D	D	L	P	E	G	V	Y	N	E	Q	F	K	K	W	D	L	G	D	I	L	G	A	K	G	K	L	F	K	T	K	T
Query Conservation																.	.	.	.	.	.	.										.	.	.
Alig confidence																.	.	.	.	.	.	.										.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.
Template Sequence		P	G	M	T	A	T	F	E	G	E	V	I	S	A	L	P	I	K	E	F	K	R	A	D	G	S	I	G	K	L	K	S	F	I	V	R	D	E	T	G	S	I	R	V	T	L	W	D	N	.	.	.	.	.	.	.	.	L	T	D	I	D	V	G	R	G	D	Y	V	R	V	R	G	Y	I	R	E	G	Y	Y
Template Known Secondary structure		S	S																					T	T	S													T	T									G	G	.	.	.	.	.	.	.	.	G	G	G	S				T	T													T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	L	S	I	H	C	T	E	L	R	L	L	T	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	L	E	C	T	A	N	Y	V	E	I	L	K	K	G
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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