Job Description P0A8N3 Confidence 99.95% Date Thu Jan 5 11:08:14 GMT 2012 Rank 30 Aligned Residues 205 % Identity 18% Template c2rhqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase alpha chain; PDBTitle: phers from staphylococcus haemolyticus- rational protein2 engineering and inhibitor studies Resolution 2.20 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.												.	.												.	.
Query SS confidence																																										.	.	.	.	.	.	.	.												.	.												.	.
Query Sequence		R	S	Q	I	L	S	G	I	R	Q	F	M	V	N	R	G	F	M	E	V	E	T	P	M	M	Q	V	I	P	G	G	A	A	A	R	P	F	I	T	H	.	.	.	.	.	.	.	.	H	N	A	L	D	L	D	M	Y	L	R	.	.	I	A	P	E	L	Y	L	K	R	L	V	.	.	V	G	G	F	E	R
Query Conservation																																										.	.	.	.	.	.	.	.												.	.												.	.
Alig confidence																																										.	.	.	.	.	.	.	.												.	.												.	.
Template Conservation
Template Sequence		L	T	R	T	V	E	E	I	E	D	L	F	L	G	L	G	Y	E	I	V	D	G	Y	E	V	E	Q	D	Y	Y	N	F	E	A	L	N	L	P	K	S	H	P	A	R	D	M	Q	D	S	F	Y	I	T	D	E	I	L	M	R	T	H	T	S	P	V	Q	A	R	T	M	E	K	R	N	G	Q	G	P	V	K
Template Known Secondary structure															T	T	T								S								T	G	G	G	T			T	T		G	G	G		T	T	T	S		B	S	S	S	S					S	S	S											T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		V	F	E	I	N	R	N	F	R	N	E	G	I	S	V	R	H	N	P	E	F	T	M	M	E	L	Y	M	A	Y	.	.	A	D	Y	K	D	L	I	E	L	T	E	S	L	F	R	T	L	A	Q	D	I	L	G	K	T	E	V	T	Y	G	D	V	T	L	D	F	G	K	P	F	E	K	L	T	M	R	E	A
Query Conservation																																.	.
Alig confidence																																.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	C	P	G	K	V	Y	R	R	D	S	D	D	A	T	H	S	H	Q	F	T	Q	I	E	G	L	V	V	D	K	N	I	K	M	S	D	L	K	G	T	L	E	L	V	A	K	K	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															B	T	T	B		S												S	S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.				400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		I	K	K	Y	R	P	E	T	D	M	A	D	L	D	N	F	D	S	A	K	A	I	A	E	S	I	G	I	H	V	E	K	S	W	G	L	G	R	I	V	T	E	I	F	E	E	V	A	E	A	H	L	I	Q	P	T	F	I	T	E	Y	P	A	E	V	S	P	.	.	.	L	A	R	R	N	D	V	N	P	E
Query Conservation																																																																					.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	R	E	I	R	L	R	P	S	Y	F	P	F	T	E	P	S	V	E	V	D	V	S	C	F	K	C	K	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T										B	T	T												S	S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																			242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.			.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		I	T	D	R	F	E	F	F	I	G	G	R	E	I	G	N	G	F	S	E	L	N	D	A	E	D	Q	A	Q	R	F	L	D	Q	V	A	A	K	D	A	G	D	D	E	A	M	F	Y	D	E	D	Y	V	T	A	L	E	H	G	L	P	P	T	A	G	.	.	L	G	I	G	I	D	R	M	V	M	L	F	T
Query Conservation																																																																			.	.
Alig confidence																	.							.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																	.							.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	C	N	V	C	K	H	T	G	W	I	E	I	L	.	G	A	G	M	V	H	.	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	E	M	A	G	F	D	S	N	E	Y	S	G	F	A	F	G	M	G	P	D	R	I	A	M	L	K	Y
Template Known Secondary structure		S			T	T	T	T	T	S	S						.							.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T			T	T	T
Template Predicted Secondary structure																	.							.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.		.	.																											.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	H	T	I	R	D	V	I	L	F	P	A
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		G	I	E	D	I	R	Y	.	.	F	Y	T	N
Template Known Secondary structure		T				T	T		.	.
Template Predicted Secondary structure									.	.
Template SS confidence
		325	.	.	.	.	330	.			.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions