Job Description P0A8N3 Confidence 97.83% Date Thu Jan 5 11:08:14 GMT 2012 Rank 88 Aligned Residues 98 % Identity 24% Template c2pmfA_ PDB info PDB header:ligase Chain: A: PDB Molecule:glycyl-trna synthetase; PDBTitle: the crystal structure of a human glycyl-trna synthetase mutant Resolution 2.85 Å

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.
Predicted Secondary structure																	.																	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	K	V	R	S	Q	I	L	S	G	I	R	Q	F	M	.	V	N	R	G	F	M	E	V	E	T	P	M	M	Q	V	I	.	.	.	.	P	G	G	A	A	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.																	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	A	L	K	N	N	I	I	Q	T	W	R	Q	H	F	I	Q	E	E	Q	I	L	E	I	D	C	T	M	L	T	P	E	P	V	L	K	T	S	G	H	V	D	K	F	A	D	F	M	V	K	D	V	K	N	G	E	C	F	R	A	D	H	L	L	K	A	H	L	Q	K	L	M	S	D	K	K	C	S	V	E
Template Known Secondary structure																T					T								S									T	T		T	T	T	S								B	T	T	T																			S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
																																																222	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.						.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	I	T	H	H	N	A	L	D	L	D	M	Y	.	L	R	I	A	P	E	L	.	.	.	.	.	Y	L	K	R	L	V	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.
Template Conservation
Template Sequence		K	K	S	E	M	E	S	V	L	A	Q	L	D	N	Y	G	Q	Q	E	L	A	D	L	F	V	N	Y	N	V	K	S	P	I	T	G	N	D	L	S	P	P	V	S	F	N	L	M	F	K	T	F	I	G	P	G	G	N	M	P	G	Y	L	R	P	E	T	A	Q	G	I	F	L	N	F	K	R	L	L	E	F
Template Known Secondary structure											T	T	G	G	G													T	T				S	S	S				B									S						S	S	S	S	S	S						S		S						T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure						.	.	.													.	.	.
Query SS confidence						.	.	.													.	.	.
Query Sequence		G	G	F	E	.	.	.	R	V	F	E	I	N	R	N	F	R	N	E	.	.	.	G	I	S	V	R	H	N	P	E	F	T	M	M	E	L	Y
Query Conservation						.	.	.													.	.	.
Alig confidence						.	.	.													.	.	.
Template Conservation
Template Sequence		N	Q	G	K	L	P	F	A	A	A	Q	I	G	N	S	F	R	N	E	I	S	P	R	S	G	L	I	R	V	R	E	F	T	M	A	E	I	E
Template Known Secondary structure		T	T	T		S															S	S			S	T	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions