 |
Job Description | P46837 | Confidence | 28.72% | Date | Thu Jan 5 12:04:18 GMT 2012 |
Rank | 263 | Aligned Residues | 84 |
% Identity | 13% | Template | d3bula2 |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | 2.30 |
|
 |
  |   |
369 | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | |
. | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | |
|
. | . | . | . | . | 440 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | T | V | A | A | L | C | E | K | H | N | V | E | L | V | A | I | . |
G | N | G | T | A | S | R | E | T | E | R | F | Y | L | D | V | Q | K | Q | F | P | K | V | T | A | Q | K | V | I | V | S | E | A | G | A | S | V | Y | S | A | S | E | L | A | A | Q | E | F | P | . |
. |
D | L | D | V | S | L | R | G | A | V | S |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|
|   |
|   |   |
|   |   |
|
|
| . | . |
|   |   |   |   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   | . |   |
|   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|
|   |   |
|
|   |
Template Sequence |   |
E | K | I | L | R | T | A | K | E | V | N | A | D | L | I | G | L | S | G | L | I | T | P | S | L | D | E | M | V | N | V | A | K | E | M | E | R | . |
Q | G | F | T | I | P | L | L | I | G | G | A | T | T | S | K | A | H | T | A | V | K | I | E | Q | N | Y | S | G | P | T | V | Y | V | Q | N | A | S | R | T | V | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|
| S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T |
|
| S |
|  |  |  |  | S | T | T |
|
|  |  |  |  |  |  |  | T | G | G | G |
| S | S |
|  |  |  |
|
| S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
787 | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | |
. | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . |
  |
  |   |
446 | . | . | . | 450 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | R | R | L | Q | D | P |
Query Conservation |   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |
Template Sequence |   |
V | V | A | A | L | L | S | D |
Template Known Secondary structure |   |
 |  |  |  |  | T |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
866 | . | . | . | 870 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|