 |
Job Description | P46837 | Confidence | 90.79% | Date | Thu Jan 5 12:04:18 GMT 2012 |
Rank | 108 | Aligned Residues | 44 |
% Identity | 25% | Template | d2ix0a2 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 2.44 |
|
  |   |
653 | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | E | G | A | V | T | N | V | T | N | F | G | A | F | V | D | I | G | V | H | Q | D | G | L | V | H | I | S | S | L | S | N | K | F | V | E | D | P | H | T | V | V | K | A | G | D | I | V | K | V | K | V | L | E |
Query Conservation |   |
  |
|   |
|   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|
|   |
|   |
|
|
|   |   |
|   |   |
|   |   |   |
|   |
|
|
|   |
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |   |   | . |   |
|
| . |
|
|   |   |
|
|   |   |
|
|
|
|
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |
|   |
|   |
|   |   |
Template Sequence |   |
R | A | E | G | V | V | K | A | T | . |
E | F | G | . |
F | L | E | V | D | A | Q | K | S | Y | F | I | P | P | P | Q | M | K | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | M | H | G | D | R | I | I | A | V | I | H | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
| . |
|
|  | . |  |  |  |  |  | T | T |  |  |  |  |  |
|  |  |  |  | T | T | . | . | . | . | . | . | . | . | . |
|
| T | T |
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . |
|  |  | . |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | |
30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|