Return to main results Retrieve Phyre Job Id

Job DescriptionP46837
Confidence98.84%DateThu Jan 5 12:04:18 GMT 2012
Rank45Aligned Residues70
% Identity24%Templated1smxa_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   653......660.... .....670.........680......... 690.........700.........710.........720.
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Query Sequence  ILEGAVTNVTNF. . GAFVDIGVHQDGLVHISSLSNKFVE. . . . . . . . . DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL
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Template Sequence  IYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
Template Known Secondary structure 
GGGTSSSSS
GGGS
GGG
SS


SSS


GGGT

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BTTB

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   41........50.........60.........70.........80.........90.........100.........110.........120
 
   722
Predicted Secondary structure 
Query SS confidence 
Query Sequence  D
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  S
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   121
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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