 |
Job Description | P46837 | Confidence | 66.53% | Date | Thu Jan 5 12:04:18 GMT 2012 |
Rank | 176 | Aligned Residues | 44 |
% Identity | 14% | Template | d1mpga1 |
SCOP info | DNA-glycosylase
| DNA-glycosylase
| DNA repair glycosylase, 2 C-terminal domains
|
Resolution | 1.80 |
|
  |   |
510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | |
|
. | . | . | 530 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | L | T | R | M | M | A | Q | N | I | V | A | W | R | D | E | . |
. |
N | G | Q | F | Q | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | Q | Q | L | L | K | V | S | R | L | G | P | K | A | F | E | Q | C | A | G | F |
Query Conservation |   |
  |
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   | . | . |   |
|   |
|   |
| . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |
|
|
|   |
|
|
|   |
Template Sequence |   |
L | G | M | P | L | K | R | A | E | A | L | I | H | L | A | N | A | A | L | E | G | T | L | P | M | T | I | P | G | D | V | E | Q | A | M | K | T | L | Q | T | F | P | G | I | G | R | W | T | A | N | Y | F | A | L | R |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
| S | S |
|
| S |
|  |  |  |  |  |  |  |  | T | T | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|