Job Description P46837 Confidence 23.27% Date Thu Jan 5 12:04:18 GMT 2012 Rank 279 Aligned Residues 75 % Identity 23% Template c3c6aA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:terminase large subunit; PDBTitle: crystal structure of the rb49 gp17 nuclease domain Resolution 1.16 Å

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		325	.	.	.	.	330	.	.	.	.	.				.	.	.	.	340	.	.	.	.	.	.	.	.	.				350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.															.	.	.																																					.
Query SS confidence													.	.	.															.	.	.																																					.
Query Sequence		G	L	R	A	T	M	G	L	D	P	G	.	.	.	L	R	T	G	V	K	V	A	V	V	D	A	T	G	.	.	.	K	L	V	A	T	D	T	I	Y	P	H	T	G	Q	A	A	K	A	A	M	T	V	A	A	L	C	E	K	H	N	V	E	L	V	A	I	.	G	N	G	T	A	S	R	E	T	E	R	F
Query Conservation													.	.	.															.	.	.																																					.
Alig confidence													.	.	.															.	.	.									.	.																											.
Template Conservation																																									.	.
Template Sequence		G	R	K	Y	V	A	T	L	D	C	S	E	G	R	G	Q	D	Y	H	A	L	Q	I	I	D	I	T	E	F	P	Y	K	Q	V	A	V	Y	H	S	.	.	N	T	T	S	H	F	I	L	P	D	I	V	F	K	Y	L	M	M	Y	N	E	C	P	V	Y	I	E	L	N	S	T	G	V	S	I	A	K	S	L
Template Known Secondary structure		T												S	S	S	S											S	S	S	S										.	.	S				T	T	T												T	T	S						B		S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
		398	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	D	L
Template Known Secondary structure				T	S
Template Predicted Secondary structure
Template SS confidence
		468	.	470	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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