Job Description P46837 Confidence 97.41% Date Thu Jan 5 12:04:18 GMT 2012 Rank 63 Aligned Residues 74 % Identity 18% Template c3ayhB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-directed rna polymerase iii subunit rpc8; PDBTitle: crystal structure of the c17/25 subcomplex from s. pombe rna2 polymerase iii Resolution 2.19 Å

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		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.																			.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		Q	P	G	M	I	L	E	G	A	V	T	N	V	T	N	F	G	A	F	V	D	I	G	V	H	Q	D	G	L	V	H	I	S	S	L	S	N	K	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	P	H	T	V	V	K	A	G	D	I	V	K	V	K	V	L	E	V	D	.
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		F	R	G	E	V	M	L	G	K	I	K	S	C	S	E	E	G	I	R	V	T	I	S	F	F	D	D	I	F	I	P	K	D	M	L	F	D	P	C	V	F	R	P	D	E	R	A	W	V	W	K	I	E	G	E	D	G	S	E	G	T	E	L	Y	F	D	I	D	E	E	I	R	F	Q	I	E	S	E	D	F
Template Known Secondary structure			T	T												T	T							S	S								G	G	G	B		T	T					G	G	G	T										T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
				710	.	.	.	.	.	.	.	.	.	720	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	Q	R	K	R	I	A	L	T	M	R	L	D
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		V	D	V	S	P	Y	T	L	I	A	S	C	S	R	D
Template Known Secondary structure						S							B		S	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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