Job Description P46837 Confidence 84.34% Date Thu Jan 5 12:04:18 GMT 2012 Rank 135 Aligned Residues 83 % Identity 13% Template c2ytxA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the second cold-shock domain of the human2 kiaa0885 protein (unr protein) Resolution UNK

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		649	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.		.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		Q	P	G	M	I	L	E	G	A	V	T	N	V	T	N	F	G	A	F	V	D	I	G	V	.	H	Q	D	G	L	V	H	I	S	S	L	S	N	K	F	V	E	D	P	H	T	V	V	K	A	G	D	I	V	K	V	K	V	L	E	V	D	L	Q	R	K	R	I	A	L	T	M	R	L	D	E	Q	P	G	E
Query Conservation																										.
Alig confidence																										.																		.	.	.	.	.
Template Conservation																																												.	.	.	.	.
Template Sequence		K	K	Q	A	R	C	Q	G	V	V	C	A	M	K	E	A	F	G	F	I	E	R	G	D	V	V	K	E	I	F	F	H	Y	S	E	F	K	G	D	L	E	T	.	.	.	.	.	L	Q	P	G	D	D	V	E	F	T	I	K	D	R	N	G	K	E	V	A	T	D	V	R	L	L	P	Q	G	T	V	I	F
Template Known Secondary structure																S	S							S	S	S								T	T	T			S		T	T	S	.	.	.	.	.			S												S	S	S		B										S	S
Template Predicted Secondary structure																																												.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		728	.	730	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	A	R	R	G	G	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	I	S	G	P	S	S	G
Template Known Secondary structure			S			S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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