Job Description P46837 Confidence 100.00% Date Thu Jan 5 12:04:18 GMT 2012 Rank 1 Aligned Residues 721 % Identity 67% Template c2oceA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pa5201; PDBTitle: crystal structure of tex family protein pa5201 from2 pseudomonas aeruginosa Resolution 3.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.							.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		D	S	F	C	R	I	I	A	G	E	I	Q	.	.	.	.	.	.	A	R	P	E	Q	V	D	A	A	V	R	L	L	D	E	G	N	T	V	P	F	I	A	R	Y	R	K	E	I	T	G	G	L	D	D	T	Q	L	R	N	L	E	T	R	L	S	Y	L	R	E	L	E	E	R	R	Q	A	I	L	K	S	I
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	I	N	T	R	I	A	E	E	L	S	A	L	P	S	G	R	V	Q	P	Q	Q	V	A	A	A	V	A	L	L	D	E	G	S	T	V	P	F	I	A	R	Y	R	K	E	V	T	G	S	L	D	D	T	Q	L	R	M	L	E	E	R	L	R	Y	L	R	E	L	E	E	R	R	G	A	I	L	A	S	I
Template Known Secondary structure													T	T	S	T	T																T	T	T															T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	Q	G	K	L	T	D	D	L	A	K	A	I	N	A	T	L	S	K	T	E	L	E	D	L	Y	L	P	Y	K	P	K	R	R	T	R	G	Q	I	A	I	E	A	G	L	E	P	L	A	D	L	L	W	S	D	P	S	H	T	P	E	V	A	A	A	Q	Y	V	Y	A	D	K	G	V	A	D	T	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	Q	G	K	L	T	P	E	L	A	R	D	I	K	L	A	D	T	K	T	R	L	E	D	L	Y	L	P	Y	K	Q	K	R	R	T	K	G	Q	I	A	L	E	A	G	L	G	A	L	A	D	A	L	F	D	D	P	T	L	V	P	E	S	E	A	A	R	F	V	D	A	E	K	G	F	A	D	V	K	A
Template Known Secondary structure				T	T															S									T	T	T	S													T	T	T											T	T	S								T	T		B	G	G	G	T	B		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	G	A	R	Y	I	L	M	E	R	F	A	E	D	A	A	L	L	A	K	V	R	D	Y	L	W	K	N	A	H	L	V	S	T	V	V	S	G	K	E	E	E	G	A	K	F	R	D	Y	F	D	H	H	E	P	L	S	T	V	P	S	H	R	A	L	A	M	F	R	G	R	N	E	G	V	L	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	E	G	A	K	Y	I	L	M	E	R	F	A	E	D	A	T	L	L	D	K	L	R	V	F	M	K	N	E	A	T	L	T	A	R	V	V	P	G	K	E	Q	E	G	A	K	F	S	D	Y	F	E	H	D	E	P	L	K	S	A	P	S	H	R	A	L	A	I	F	R	G	R	N	E	G	V	L	S	A
Template Known Secondary structure															T	T															T									T	T					T	G	G	G	T	T	T	S	S					T	T	S																T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	A	D	P	Q	F	D	E	P	P	K	E	S	Y	C	E	Q	I	I	M	D	H	L	G	L	R	L	N	N	A	P	A	D	S	W	R	K	G	V	V	S	W	T	W	R	I	K	V	L	M	H	L	E	T	E	L	M	G	T	V	R	E	R	A	E	D	E	A	I	N	V	F	A	R	N	L	H	D
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		S	L	K	V	G	E	E	A	P	G	T	L	H	P	C	E	V	M	I	A	E	R	F	.	.	G	L	S	N	Q	G	R	A	A	D	K	W	L	A	E	V	V	R	W	T	W	K	V	K	L	Y	T	H	L	E	T	D	L	F	G	E	L	R	D	G	A	E	D	E	A	I	S	V	F	A	R	N	L	H	D
Template Known Secondary structure						S				S	S												T	T	.	.	T				S	S																		T
Template Predicted Secondary structure																									.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		L	L	M	A	A	P	A	G	L	R	A	T	M	G	L	D	P	G	L	R	T	G	V	K	V	A	V	V	D	A	T	G	K	L	V	A	T	D	T	I	Y	P	H	T	G	.	.	Q	A	A	K	A	A	M	T	V	A	A	L	C	E	K	H	N	V	E	L	V	A	I	G	N	G	T	A	S	R	E	T	E
Query Conservation																																															.	.
Alig confidence																																															.	.
Template Conservation
Template Sequence		L	L	L	A	A	P	A	G	P	R	A	T	L	G	L	D	P	G	L	R	T	G	V	K	V	A	V	V	D	A	T	G	K	L	L	D	T	A	T	V	Y	P	H	A	P	K	N	Q	W	D	Q	T	L	A	V	L	A	A	L	C	A	K	H	Q	V	E	L	I	A	I	G	N	G	T	A	S	R	E	T	D
Template Known Secondary structure				T	S					S	S									S	T	T									T	T	S											S	T	T	T																	T	T								S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	Y	L	D	V	Q	K	Q	F	P	K	V	T	A	Q	K	V	I	V	S	E	A	G	A	S	V	Y	S	A	S	E	L	A	A	Q	E	F	P	D	L	D	V	S	L	R	G	A	V	S	I	A	R	R	L	Q	D	P	L	A	E	L	V	K	I	D	P	K	S	I	G	V	G	Q	Y	Q	H	D	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	A	G	E	L	I	K	K	Y	P	G	M	K	L	T	K	I	M	V	S	E	A	G	A	S	V	Y	S	A	S	E	L	A	A	K	E	F	P	E	L	D	V	S	L	R	G	A	V	S	I	A	R	R	L	Q	D	P	L	A	E	L	V	K	I	E	P	K	S	I	G	V	G	Q	Y	Q	H	D	V	S
Template Known Secondary structure									T	T		G	G	G										T	T							S								S	S	S																						T	T	S		G	G	G	S			S	S	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	Q	L	A	R	K	L	D	A	V	V	E	D	C	V	N	A	V	G	V	D	L	N	T	A	S	V	P	L	L	T	R	V	A	G	L	T	R	M	M	A	Q	N	I	V	A	W	R	D	E	N	G	Q	F	Q	N	R	Q	Q	L	L	K	V	S	R	L	G	P	K	A	F	E	Q	C	A	G	F	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	K	L	A	R	S	L	D	A	V	V	E	D	C	V	N	A	V	G	V	D	V	N	T	A	S	A	A	L	L	A	R	I	S	G	L	N	S	T	L	A	Q	N	I	V	A	H	R	D	A	N	G	A	F	R	T	R	D	E	L	K	K	V	S	R	L	G	E	K	T	F	E	Q	A	A	G	F	L	R
Template Known Secondary structure																			T	T		B		T	T	T								T	S	T	T																				S	S	G	G	G	G	G	G	S	S	S										T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	H	G	D	N	P	L	D	A	S	T	V	H	P	E	A	Y	P	V	V	E	R	I	L	A	A	T	Q	Q	A	L	K	D	L	M	G	N	S	S	E	L	R	N	L	K	A	S	D	F	T	D	E	K	F	G	V	P	T	V	T	D	I	I	K	E	L	E	K	P	G	R	D	P	R	P	E	F	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	N	G	D	N	P	L	D	A	S	A	V	H	P	E	T	Y	P	L	V	Q	R	I	A	A	D	T	E	R	D	I	R	S	L	I	G	D	S	A	F	L	K	R	L	D	P	K	K	F	T	D	E	T	F	G	L	P	T	V	T	D	I	L	K	E	L	D	K	P	G	R	D	P	R	P	E	F	K	T
Template Known Secondary structure			S	S		S	S	G	G	G	S	S	S			G	G	G						T	T		S	S			T	G	G	G	S	T	T							S				S		S			S	S	S			S	T	T	T	T	T	T					T	S	T	T				S
Template Predicted Secondary structure
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	F	A	D	G	V	E	T	M	N	D	L	Q	P	G	M	I	L	E	G	A	V	T	N	V	T	N	F	G	A	F	V	D	I	G	V	H	Q	D	G	L	V	H	I	S	S	L	S	N	K	F	V	E	D	P	H	T	V	V	K	A	G	D	I	V	K	V	K	V	L	E	V	D	L	Q	R	K	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	F	Q	E	G	V	E	S	L	K	D	L	K	P	G	M	V	L	E	G	V	V	T	N	V	T	N	F	G	A	F	V	D	I	G	V	H	Q	D	G	L	V	H	I	S	A	L	S	E	K	F	V	K	D	P	Y	E	V	V	K	A	G	D	I	V	K	V	K	V	M	E	V	D	I	P	R	N	R	V
Template Known Secondary structure		S	S	G	G	G	G			S	S	T	T			T	T												T	T							S	S	S	S			B		B	S	G	G	G		S	S			S								T	T												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
		716	.	.	.	720	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	M	R	L	D	E	Q	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	S	M	R	M	S	D	T	P	G
Template Known Secondary structure					S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		720	.	.	.	.	.	.	.	.	.	730