Return to main results Retrieve Phyre Job Id

Job DescriptionP46837
Confidence68.96%DateThu Jan 5 12:04:18 GMT 2012
Rank172Aligned Residues40
% Identity23%Templatec2ihmA_
PDB info PDB header:transferase/dnaChain: A: PDB Molecule:dna polymerase mu; PDBTitle: polymerase mu in ternary complex with gapped 11mer dna2 duplex and bound incoming nucleotide
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   505....510.........520.........530.........540. ........
Predicted Secondary structure 












.......

Query SS confidence 




































. . . . . . .







Query Sequence  LLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR. . . . . . . LGPKAFEQ
Query Conservation 

  
 






  

  
   
 
 

  
  
  .......

 


 
Alig confidence 


















.....












.......







Template Conservation   
  
 




 
  
   .....

 

 

  
   
      
 
  

Template Sequence  LFTQVFGVGVKTANRWYQE. . . . . GLRTLDELREQPQRLTQQQKAGLQYYQD
Template Known Secondary structure  TSTT

T.....T

ST

TT

T
Template Predicted Secondary structure 





.....




Template SS confidence 



















































   239240.........250....... ..260.........270.........280.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions