Job Description P46837 Confidence 86.49% Date Thu Jan 5 12:04:18 GMT 2012 Rank 128 Aligned Residues 60 % Identity 15% Template c2csdB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:topoisomerase v; PDBTitle: crystal structure of topoisomerase v (61 kda fragment) Resolution 2.90 Å

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		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.						.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.				.	.	.	.	.
Query SS confidence																																																					.				.	.	.	.	.
Query Sequence		V	S	Q	T	Q	L	A	R	K	L	D	A	V	V	E	D	C	V	N	A	V	G	V	D	L	N	T	A	S	V	P	L	L	T	R	V	A	G	L	T	R	M	M	A	Q	N	I	V	A	W	R	.	D	E	N	.	.	.	.	.	G	Q	F	Q	N	R	Q	Q	L	L	K	V	S	R	L	G	P	K	A	F
Query Conservation																																																					.				.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.				.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	E	E	A	Y	R	A	A	V	E	I	Q	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	K	K	E	G	V	G	R	K	T	A	E	R	L	L	R	A	F	G	N	P	E	R	V	K	Q	L	A	R	E	F	E	I	E	K	L	A	S	V	E	G	V	G	E	R	V	L
Template Known Secondary structure		S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T			S	S										S	S											T						T	T	S	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.																	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		548	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		461	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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