Job Description P46837 Confidence 98.02% Date Thu Jan 5 12:04:18 GMT 2012 Rank 55 Aligned Residues 75 % Identity 16% Template c2ckzB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna-directed rna polymerase iii 25 kd PDBTitle: x-ray structure of rna polymerase iii subcomplex c17-c25. Resolution 3.2 Å

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		648	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.													.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.						.	710
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		L	Q	P	G	M	I	L	E	G	A	V	T	N	V	T	N	F	G	A	F	V	D	I	G	V	H	Q	D	G	L	V	H	I	S	S	L	S	N	K	F	V	.	.	.	.	.	.	.	.	.	.	.	.	E	D	P	H	T	V	V	K	A	G	D	I	V	K	V	K	V	L	E	V	.	.	.	.	.	D	L
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		P	F	L	G	E	I	V	T	G	W	I	S	K	C	T	A	E	G	I	K	V	S	L	L	G	I	F	D	D	I	F	I	P	Q	N	M	L	F	E	G	C	Y	Y	T	P	E	E	S	A	W	I	W	P	M	D	T	K	L	Y	F	D	V	N	E	K	I	R	F	R	I	E	R	E	V	F	V	D	V	K	P
Template Known Secondary structure				T	T												T	T							T	T	S								T	T	T	S		T	T					T	T	T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		711	.	.	.	.	.	.	.	.	720	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	K	R	I	A	L	T	M	R	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	Y	A	L	L	G	S	C	Q	T	D
Template Known Secondary structure			S									S	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions