Return to main results Retrieve Phyre Job Id

Job DescriptionP46837
Confidence72.98%DateThu Jan 5 12:04:18 GMT 2012
Rank163Aligned Residues40
% Identity23%Templatec2bcuA_
PDB info PDB header:transferase, lyase/dnaChain: A: PDB Molecule:dna polymerase lambda; PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   506...510.........520.........530...... ...540......
Predicted Secondary structure 









..........




Query SS confidence 






























. . . . . . . . . .









Query Sequence  LTRVAGLTRMMAQNIVAWRDENGQFQNRQQL. . . . . . . . . . LKVSRLGPKA
Query Conservation 
  
 






  

  
   
 
 

  
..........  
  

 

Alig confidence 




















.








..........









Template Conservation     




  

 

 
 
 
.
    

 
      
  
  
 





Template Sequence  ACSIPGIGKRMAEKIIEILES. GHLRKLDHISESVPVLELFSNIWGAGTKT
Template Known Secondary structure  TSTT

.SS
GGGGG

TTTSTT

Template Predicted Secondary structure 





.








Template SS confidence 


















































   299300.........310......... 320.........330.........340........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions