Job Description P46837 Confidence 98.89% Date Thu Jan 5 12:04:18 GMT 2012 Rank 42 Aligned Residues 78 % Identity 21% Template c2ba1B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4; PDBTitle: archaeal exosome core Resolution 2.70 Å

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		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670											.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.
Query Sequence		V	E	T	M	N	D	L	Q	P	G	M	I	L	E	G	A	V	T	N	V	T	N	F	G	A	F	V	D	I	.	.	.	.	.	.	.	.	.	.	G	V	H	Q	D	G	L	V	H	I	S	S	L	S	N	K	F	V	E	D	P	H	T	V	V	K	A	G	D	I	V	K	V	K	V	L	E	V	D	L	Q
Query Conservation																															.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.																																						.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		I	S	P	I	P	E	I	V	K	G	D	V	V	L	G	R	V	V	D	L	R	N	S	I	A	L	I	E	V	S	S	K	K	G	E	N	R	G	P	S	N	R	G	I	G	I	L	H	V	S	N	V	D	E	G	Y	V	K	E	I	S	E	A	V	G	Y	L	D	I	L	K	A	R	V	I	G	.	.	.	.
Template Known Secondary structure		S	S							T	T												T	T										T	T		S	S			S	S								T	T	S	S	S	S	S				S	S	T	T	T			S	S									S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		712	.	.	.	.	.	.	.	720	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	R	I	A	L	T	M	R	L	D	E	Q
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	D	N	L	R	L	S	T	K	E	E	E	M
Template Known Secondary structure		.	T	T	T						S	T	T
Template Predicted Secondary structure		.
Template SS confidence
			125	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions