 |
Job Description | P46837 | Confidence | 93.88% | Date | Thu Jan 5 12:04:18 GMT 2012 |
Rank | 86 | Aligned Residues | 96 |
% Identity | 15% | Template | c1zxoB_ |
PDB info |
PDB header:unknown function | Chain: B: PDB Molecule:conserved hypothetical protein q8a1p1; |
PDBTitle: x-ray crystal structure of protein q8a1p1 from bacteroides2 thetaiotaomicron. northeast structural genomics consortium3 target btr25.
|
Resolution | 3.20 Å |
|
 |
  |   |
329 | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | |
|
. | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | |
|
|
|
. | 380 | . | . | . | . | . | |
. | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | M | G | L | D | P | G | L | R | T | G | V | K | V | A | V | V | D | A | T | G | K | L | V | A | T | D | T | I | Y | . |
. |
P | H | T | G | Q | A | A | K | A | A | M | T | V | A | A | L | C | E | K | H | . |
. |
. |
. |
N | V | E | L | V | A | I | . |
G | N | G | T | A | S | R | E | T | E | R | F | Y | L | D | V |
Query Conservation |   |
|
|
|
|
|
|
|   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |
|
|
|   |   |   |
|   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . | . |   |
|   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
| . |
|
|
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | L | I | A | D | S | G | . |
S | T | K | T | D | W | C | V | V | L | N | G | A | V | I | K | R | L | G | T | K | G | I | N | P | F | F | Q | S | E | E | E | I | Q | Q | K | L | T | A | S | L | L | P | Q | L | P | E | G | K | F | N | A | V | Y | F | Y | G | A | G | C | T | P | E | K | A | P | V | L | R | R | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  | S | S | S | S |  |  |  |
|
|  |  |
|
|
|
| T | T | T | S |
|  |  |  |  |  |  |  |  |  | T | T | T | G | G | G | S |
| S | S |
|  |  |  |  |  |  |  |  | T | T |
|
| T | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | |
. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
402 | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | Q | F | P | K | V | T | A | Q | K | V | I | V | S | E | A | G | A | S | V | Y | S | A | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   | . |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |
Template Sequence |   |
A | D | S | L | . |
P | V | I | G | N | I | K | A | N | S | D | X | L | A | A | A | H | G | L | C |
Template Known Secondary structure |   |
 |  |  | S | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
| . |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|