 |
Job Description | P46837 | Confidence | 83.90% | Date | Thu Jan 5 12:04:18 GMT 2012 |
Rank | 137 | Aligned Residues | 50 |
% Identity | 22% | Template | c1rrqA_ |
PDB info |
PDB header:hydrolase/dna | Chain: A: PDB Molecule:muty; |
PDBTitle: muty adenine glycosylase in complex with dna containing an2 a:oxog pair
|
Resolution | 2.22 Å |
|
  |   |
497 | . | . | 500 | . | . | |
. | . | . | . | . | . | . | 510 | . | . | . | . | |
. | . | . | . | . | 520 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 530 | |
. | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | N | T | A | S | . |
V | P | L | L | T | R | V | A | G | L | T | R | . |
M | M | A | Q | N | I | V | A | W | R | D | E | . |
. |
. |
. |
. |
N | G | Q | F | . |
Q | N | R | Q | Q | L | L | K | V | S | R | L | G | P | K | A |
Query Conservation |   |
|
|
|   |
|
| . |   |   |
|
|   |   |
|   |
|
|
|
| . |
|
|
|   |   |
|
|   |   |
|   |   | . | . | . | . | . |   |
|   |
| . |   |
|
|   |   |
|   |   |
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |
|
Template Sequence |   |
A | L | A | D | A | D | E | D | E | V | L | K | A | W | E | G | L | G | Y | Y | S | R | V | R | N | L | H | A | A | V | K | E | V | K | T | R | Y | G | G | K | V | P | D | D | P | D | E | F | S | R | L | K | G | V | G | P | Y | T |
Template Known Secondary structure |   |
 |  |  |  | S |
|  |  |  |  |  |  |  |  | T | T | S | S |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| S |  |  |  |  |  | T | S | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|