Job Description P46837 Confidence 74.17% Date Thu Jan 5 12:04:18 GMT 2012 Rank 158 Aligned Residues 203 % Identity 9% Template c1bmtB_ PDB info PDB header:methyltransferase Chain: B: PDB Molecule:methionine synthase; PDBTitle: how a protein binds b12: a 3.o angstrom x-ray structure of2 the b12-binding domains of methionine synthase Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300												.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																				.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Q	F	D	E	P	P	K	E	S	Y	C	E	Q	I	I	M	D	H	L	G	L	R	L	N	N	A	P	A	D	S	W	R	K	.	G	V	V	S	W	T	W	R	I	K	V	L	M	H	L	E	T	E	L	M	G	T	V	R	.	.	.	.	.	.	.	.	.	.	.	E	R	A	E	D	E	A	I	N	V
Query Conservation																																				.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	W	R	S	W	E	V	N	K	R	L	E	Y	S	L	V	K	G	I	T	E	F	I	E	Q	D	T	E	E	A	R	Q	Q	A	T	R	P	I	E	V	I	E	G	P	L	M	D	G	M	N	V	V	G	D	L	F	G	E	G	K	M	F	L	P	Q	V	V	K	S	A	R	V	M	K	Q	A	V	A	Y
Template Known Secondary structure			G	G	G	G	S													T			S	S												S	S	S							T															T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		652	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																											.	.									.	.																																											.
Query SS confidence																											.	.									.	.																																											.
Query Sequence		F	A	R	N	L	H	D	L	L	M	A	A	P	A	G	L	R	A	T	M	G	L	D	P	G	.	.	L	R	T	G	V	K	V	A	.	.	V	V	D	A	T	G	K	L	V	A	T	D	T	I	Y	P	H	T	G	Q	A	A	K	A	A	M	T	V	A	A	L	C	E	K	H	N	V	E	L	V	A	I	.
Query Conservation																											.	.									.	.																																											.
Alig confidence																											.	.									.	.															.	.	.	.	.	.	.																						.
Template Conservation																																																					.	.	.	.	.	.	.
Template Sequence		L	E	P	F	I	E	A	S	K	E	Q	G	K	T	N	G	K	M	V	I	A	T	V	K	G	D	V	H	D	I	G	K	N	I	V	G	V	V	L	Q	C	N	N	Y	E	I	V	D	L	G	V	.	.	.	.	.	.	.	M	V	P	A	E	K	I	L	R	T	A	K	E	V	N	A	D	L	I	G	L	S
Template Known Secondary structure								T	S			S				S									T	T																T	T	S								S	.	.	.	.	.	.	.	S														T		S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.
Template SS confidence
		732	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.								.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																																																		.				.
Query SS confidence																																																		.				.
Query Sequence		G	N	G	T	A	S	R	E	T	E	R	F	Y	L	D	V	Q	K	Q	F	P	K	V	T	A	Q	K	V	I	V	S	E	A	G	A	S	V	Y	S	A	S	E	L	A	A	Q	E	F	.	P	D	L	.	D	V	S	L	R	G	A	V	S	I	A	R	R	L	Q	D	P
Query Conservation																																																		.				.
Alig confidence																					.																													.				.
Template Conservation																					.
Template Sequence		G	L	I	T	P	S	L	D	E	M	V	N	V	A	K	E	M	E	R	.	Q	G	F	T	I	P	L	L	I	G	G	A	T	T	S	K	A	H	T	A	V	K	I	E	Q	N	Y	S	G	P	T	V	Y	V	Q	N	A	S	R	T	V	G	V	V	A	A	L	L	S	D
Template Known Secondary structure				S																	.	T	T			S						S	T	T									T	T	G	G	G		S	S							S														T
Template Predicted Secondary structure																					.
Template SS confidence
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.		.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions