Return to main results Retrieve Phyre Job Id

Job DescriptionP60872
Confidence11.90%DateThu Jan 5 12:07:13 GMT 2012
Rank74Aligned Residues56
% Identity16%Templated1wi4a1
SCOP infoPDZ domain-like PDZ domain-like PDZ domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   201........210.........220... ......230.........240.........250.........
Predicted Secondary structure 












.

















Query SS confidence 






















.



































Query Sequence  GALIKTINIRVENPNLHDLAIKD. VPILNGDKIICSRLKREETLKVPSPDTIIQLGDLLH
Query Conservation               
 





 
.          
  
 
            
  

 
 
Alig confidence 






















.

















...














Template Conservation          
      


  
 
         
 
  
  

... 
   
 
  

 

Template Sequence  DRDPAFRVITVTKETGLGLKILGGINRNEGPLVYIHEVIPGG. . . DCYKDGRLKPGDQLV
Template Known Secondary structure 


TT

SS



SSSSS
SS
TTS...
S

TT
B
Template Predicted Secondary structure 























...








Template SS confidence 



























































   11........20.........30.........40.........50.. .......60.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions