 |
Job Description | P60872 | Confidence | 9.58% | Date | Thu Jan 5 12:07:13 GMT 2012 |
Rank | 91 | Aligned Residues | 58 |
% Identity | 9% | Template | d1ufxa_ |
SCOP info | PDZ domain-like
| PDZ domain-like
| PDZ domain
|
Resolution | UNK |
|
 |
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | N | G | G | A | L | I | K | T | I | N | I | R | V | E | N | P | N | L | H | D | L | A | I | K | D | V | P | I | L | N | G | D | K | I | I | C | S | R | L | K | R | E | E | T | L | K | V | P | S | P | D | T | I | I | Q | L | G | D | L | L | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |
|   |
|   |   |   |
| . |
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|
| . | . | . |   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|
Template Sequence |   |
G | S | S | G | S | S | G | T | L | V | R | V | K | K | S | A | A | T | . |
L | G | I | A | I | E | G | G | A | N | T | R | Q | P | L | P | R | I | V | T | I | Q | R | G | G | . |
. |
. |
S | A | H | N | C | G | Q | L | K | V | G | H | V | I | L |
Template Known Secondary structure |   |
|
|
|
| S | S | S |  |  |  |  |  |  |
|
| S | S | S | . |
|
|  |  |  |  |
| B | T | T | S | S |
| S | S |
|  |  |  |  |  |
| T | T | S | . | . | . |  |  |  |  |  |
| S | S |
| T | T |
| B |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|