Job Description P60872 Confidence 53.94% Date Thu Jan 5 12:07:13 GMT 2012 Rank 20 Aligned Residues 112 % Identity 17% Template c3r0hA_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:inactivation-no-after-potential d protein; PDBTitle: structure of inad pdz45 in complex with ng2 peptide Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.										.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		L	N	G	D	K	I	I	C	S	R	L	K	R	E	E	T	L	K	V	P	S	P	D	T	I	I	Q	L	G	D	L	L	H	L	V	G	.	.	.	.	.	.	.	.	.	Q	P	A	D	L	H	N	A	Q	L	V	I	G	Q	E	V	D	T	S	L	S	T	K	G	T	D	L	R	V	E	R	V	V	V	T
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.
Template Sequence		H	V	T	T	G	C	V	I	T	H	V	Y	P	E	G	Q	.	.	.	V	A	A	D	K	R	L	K	I	F	D	H	I	C	D	I	N	G	T	P	I	H	V	G	S	M	T	T	L	K	V	H	Q	L	F	H	T	T	Y	E	K	A	V	T	L	T	V	F	R	A	D	P	P	E	L	E	K	F	N	V	D
Template Known Secondary structure		S			S									T	T	S		.	.	.									T	T							T	T					G	G	G	S											S			S	S										S	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.				.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	N	V	L	G	K	R	I	R	D	L	H	F	K	E	R	Y	D	V	V	I	S	R	L	N	R	A	G	V	E	L	V	A	S	G	D	I	S	L	Q	F	G	D	I	L	N
Query Conservation
Alig confidence																																					.	.	.
Template Conservation																																					.	.	.
Template Sequence		L	M	K	K	A	G	K	E	L	G	L	S	L	S	P	N	E	I	G	C	T	I	A	D	L	I	Q	G	Q	Y	P	E	I	D	S	.	.	.	K	L	Q	R	G	D	I	I	T
Template Known Secondary structure						T	T											S	S									T	T	S							.	.	.				T	T
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.				.	.	.	.	.	.	.	.	630

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions