Job Description P60872 Confidence 25.54% Date Thu Jan 5 12:07:13 GMT 2012 Rank 33 Aligned Residues 112 % Identity 14% Template c3krmB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:insulin-like growth factor 2 mrna-binding protein PDBTitle: imp1 kh34 Resolution 2.75 Å

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		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.							.
Query SS confidence																																																														.	.	.							.
Query Sequence		E	E	T	L	K	V	P	S	P	D	T	I	I	Q	L	G	D	L	L	H	L	V	G	Q	P	A	D	L	H	N	A	Q	L	V	I	G	Q	E	V	D	T	S	L	S	T	K	G	T	D	L	R	V	E	R	V	V	V	T	N	E	.	.	.	N	V	L	G	K	R	.	I	R	D	L	H	F	K	E	R	Y
Query Conservation																																																														.	.	.							.
Alig confidence																																																														.	.	.							.
Template Conservation
Template Sequence		S	A	S	I	K	I	A	P	P	E	T	P	D	S	K	V	R	M	V	I	I	T	G	P	P	E	A	Q	F	K	A	Q	G	R	I	Y	G	K	L	K	E	E	N	F	F	G	E	E	V	K	L	E	T	H	I	R	V	P	A	S	A	A	G	R	V	I	G	K	G	G	K	T	V	N	E	L	Q	N	L	T
Template Known Secondary structure		T									S	S	S	S		S																											T	T	S															T	T	T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	I	S	R	L	N	R	A	G	V	E	L	V	A	S	G	D	I	S	L	Q	F	G	D	I	L	N	L	V	G	R	P	S	A	I	D	A	V	A	N	V	L
Query Conservation
Alig confidence												.	.	.										.	.	.	.	.
Template Conservation												.	.	.										.	.	.	.	.
Template Sequence		A	A	E	V	V	V	P	R	D	Q	.	.	.	T	P	D	E	N	D	Q	V	I	.	.	.	.	.	V	K	I	I	G	H	F	Y	A	S	Q	M	A	Q	R	K	I
Template Known Secondary structure									S	S		.	.	.				T	T	S				.	.	.	.	.
Template Predicted Secondary structure												.	.	.										.	.	.	.	.
Template SS confidence
		518	.	520	.	.	.	.	.	.	.				.	.	530	.	.	.	.	.	.						.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions