Job Description P60872 Confidence 15.71% Date Thu Jan 5 12:07:13 GMT 2012 Rank 49 Aligned Residues 120 % Identity 20% Template c2jvzA_ PDB info PDB header:splicing Chain: A: PDB Molecule:far upstream element-binding protein 2; PDBTitle: solution nmr structure of the second and third kh domains2 of ksrp Resolution UNK

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		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.										.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence		D	L	A	I	K	D	V	P	I	L	N	G	D	K	I	I	C	S	R	L	K	R	E	E	T	L	K	V	P	S	P	D	T	I	I	Q	L	G	D	L	L	H	L	V	G	Q	P	A	D	L	H	N	A	Q	L	V	I	.	.	.	.	.	.	.	.	.	G	Q	E	V	D	T	S	L	S	T	K	G	T	D
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	T	I	K	Q	L	Q	E	R	A	G	V	K	M	I	.	.	.	.	.	.	.	.	.	.	L	I	Q	D	G	S	Q	N	T	N	V	D	K	P	L	R	I	I	G	D	P	Y	K	V	Q	Q	A	C	E	M	V	M	D	I	L	R	E	R	D	Q	G	G	F	G	D	R	N	E	Y	G	S	R	I	G
Template Known Secondary structure		T									T	S		S				.	.	.	.	.	.	.	.	.	.					T	T	S	S	S	S	S																								T	T		S	S	S				S	S		S	S		T	T	S		S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.											.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		289	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.													.																																.	.
Query SS confidence												.	.													.																																.	.
Query Sequence		L	R	V	E	R	V	V	V	T	N	.	.	E	N	V	L	G	K	R	I	R	D	L	H	.	F	K	E	R	Y	D	V	V	I	S	R	L	N	R	A	G	V	E	L	V	A	S	G	D	I	S	L	Q	F	G	D	.	.	I	L	N	L	V	G	R	P	S	A	I	D	A	V	A	N	V	L
Query Conservation												.	.													.																																.	.
Alig confidence												.	.													.																	.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	I	D	V	P	V	P	R	H	S	V	G	V	V	I	G	R	S	G	E	M	I	K	K	I	Q	N	D	A	G	V	R	I	Q	F	K	Q	D	D	G	.	.	.	.	.	.	.	.	.	.	.	.	T	G	P	E	K	I	A	H	I	M	G	P	P	D	R	C	E	H	A	A	R	I	I
Template Known Secondary structure		S	S	B						T	T	T							S	S	S										T											T	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S								S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.													.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions