Job Description P60872 Confidence 12.91% Date Thu Jan 5 12:07:13 GMT 2012 Rank 65 Aligned Residues 166 % Identity 20% Template c1zcdA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:na(+)/h(+) antiporter 1; PDBTitle: crystal structure of the na+/h+ antiporter nhaa Resolution 3.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	I	A	L	T	V	S	I	L	A	L	V	A	V	V	G	L	F	I	G	N	V	K	F	R	G	I	G	L	G	I	G	G	V	L	F	G	G	I	I	V	G	H	F	V	S	Q	A	G	M	T	L	S	S	D	M	L	H	V	I	Q	E	F	G	L	I	L	F	V	Y	T	I	G	I	Q	V	G	P	G
Query Conservation
Alig confidence																													.	.	.	.																					.	.
Template Conservation																													.	.	.	.																					.	.
Template Sequence		S	S	D	A	S	G	G	I	I	L	I	I	A	A	I	L	A	M	I	M	A	N	S	G	A	T	S	.	.	.	.	G	W	Y	H	D	F	L	E	T	P	V	Q	L	R	V	G	S	L	E	I	.	.	N	K	N	M	L	L	W	I	N	D	A	L	M	A	V	F	F	L	L	V	G	L	E	V	K	R	E
Template Known Secondary structure				S	S																				S	S	S		.	.	.	.							T	T								T	T				.	.
Template Predicted Secondary structure																													.	.	.	.																					.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	A	S	L	R	V	S	G	L	R	L	N	L	F	A	V	L	I	V	I	I	G	G	L	V	T	A	I	L	H	K	L	F	D	I	P	L	P	V	V	L	G	I	F	S	G	A	V	T	N	T	P	A	L	G	A	G	Q	Q	I	L	R	D	L	G	T	P	M	E	M	V	D	Q	M	G	M	S	Y	A
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		L	M	Q	G	S	L	A	S	.	L	R	Q	A	A	F	P	V	I	A	A	I	G	G	M	I	V	P	A	L	L	Y	L	A	F	N	Y	A	D	P	I	T	R	E	G	W	A	I	P	A	A	T	D	I	A	F	A	L	G	V	L	A	L	L	G	S	R	V	P	L	A	L	K	I	F	L	M	A	L	A	I
Template Known Secondary structure				S	T	T	T	S	S	.	T	T	T	S											T	T	T	T					G	G	G			S	S	T	T					T	S	S	S	S													S	S		S	S	S		S	S	S
Template Predicted Secondary structure										.
Template SS confidence
		83	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	Y	P	F	G	I	C	G	I	L	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	D	L	G	A	I	I	I	I	A	L	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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