Job Description P39829 Confidence 30.80% Date Thu Jan 5 12:00:53 GMT 2012 Rank 18 Aligned Residues 76 % Identity 11% Template c3m7oB_ PDB info PDB header:immune system Chain: B: PDB Molecule:lymphocyte antigen 86; PDBTitle: crystal structure of mouse md-1 in complex with phosphatidylcholine Resolution 1.65 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		F	Y	I	K	V	H	D	T	D	N	V	A	I	I	V	N	D	N	G	L	K	A	G	T	R	F	P	.	.	D	G	L	E	L	I	E	H	I	P	Q	G	H	K	V	A	L	L	D	I	P	A	N	G	E	I	I	R	Y	G	E	V	I	G	Y	A	V	R	A	I	P	R	G	S	W	I	D	E	S	M
Query Conservation																													.	.
Alig confidence																													.	.													.
Template Conservation																																											.
Template Sequence		V	Y	Q	S	C	D	P	L	Q	D	F	G	L	S	I	D	Q	C	S	K	Q	I	Q	S	N	L	N	I	R	F	G	I	I	L	R	Q	D	I	R	K	L	.	F	L	D	I	T	L	M	A	K	G	S	S	I	L	N	Y	S	Y	P	L	C	F	S	F	C	G	R	R	K	G	E	Q	I	Y	Y	A	G
Template Known Secondary structure								S	S								S	S			S				S	S										S	S			S	S		.									T	T													T	T	T	T			T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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