Return to main results Retrieve Phyre Job Id

Job DescriptionP39829
Confidence30.00%DateThu Jan 5 12:00:53 GMT 2012
Rank19Aligned Residues68
% Identity12%Templatec2ywfA_
PDB info PDB header:translationChain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus
Resolution2.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   370.........380.........390.........400......... 410........ .420.........430.......
Predicted Secondary structure 




















...



.



Query SS confidence 







































. . .








.


















Query Sequence  GNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRG. . . LIYAATPAS. DFVCGTQQVASGITVQVFT
Query Conservation 

  












  
 

 

  

 
 
     
...
 





 .
 

 




 

 




Alig confidence 







































...








.


















Template Conservation 



 




   

      



                  








 

  
    
   
 



Template Sequence  AHVDHGKSTLADRLLEYTGAIGITVKMQAVRMFYKAKDGNTYKLHLIDTPGHVDFSYEVSRALAACEGALLL
Template Known Secondary structure 
TTSST






S
S
TTS




SGGGT
S
Template Predicted Secondary structure 






















Template SS confidence 







































































   13......20.........30.........40.........50.........60.........70.........80....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions